PROTEIN: HRGMv2_2106_10_5
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Protein File & Metadata
Source:
HRGMv2_2106_10_5.pdb
Genome ID:
Protein ID:
HRGMv2_2106_10_5
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Protein Sequence
MEEKSFFKEL ISEFAVMGII PLLFVTNLLI FNWKNTVLNS NNYAIFLGVL IFAATAEIIY 60 ILTHISGLNT QKIKAFWKKH KIMIIGLVII CITRLPYINT LPRWDSGEYY YRLTEGLKNC 120 TFDSFIDFQK NFALCGHPTL IFSIIYLIGE MVFPGEVIGV NLVSLVLTLI AFWCVYKILL 180 RVLRKTTYGN AAVFTIVLSF APLVYSSFSY FTPDYPMAMF IIYVIYACTY NRPLIAGFFS 240 MACFQTKETG MVLIGGYVLG ILFHYKFKYG YKGSGKNYIG EILKDARLYF IFVAAVIQFL 300 YNRFIGGVSQ WTQNSNETAG LRWDNNGTNC LGFNPDYIAI KLKQQFLLNF NWVILLIIIG 360 GFIFFLLKNG KRVHLNLKYI ELVAAFICYV AFSCIYITAS LARYNVAGDI LLYILMFGIL 420 NRIADNYKQA YISIVCGILA FIQCFFTCDP VTTAVFLKLN LGNSAIIYVG DTTKDMMYGD 480 YLVYNTKYIM INKSIDEVLK RTGYNPQEYD AVVSDNNGAC ITGNSAVFLY NWDMKKHKRV 540 FYENDNTIAM PETLQVRSLP LYDLKEKAVL IYLPYNGNVT KEDMLESANE YYEVGEEQEV 600 QTVQGCIYYY DMTLRE 616
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 5 | 616 | 1 | 508 | 0.6503 |
0.7318 |
| AF-Q9CC27-F1-model_v4 | 2 | 616 | 12 | 527 | 0.6321 |
0.7098 |
| AF-O06152-F1-model_v4 | 69 | 616 | 48 | 556 | 0.6215 |
0.7235 |
| AF-Q9HUZ2-F1-model_v4 | 79 | 616 | 7 | 476 | 0.6207 |
0.7249 |
| AF-Q92521-F1-model_v4 | 4 | 616 | 45 | 546 | 0.6098 |
0.7164 |
| AF-A0A077Z8G7-F1-model_v4 | 69 | 615 | 25 | 570 | 0.6092 |
0.6731 |
| AF-K7LWG6-F1-model_v4 | 75 | 616 | 35 | 564 | 0.6002 |
0.6772 |
| AF-I1M311-F1-model_v4 | 75 | 616 | 35 | 564 | 0.6 |
0.677 |
| AF-C0NL52-F1-model_v4 | 75 | 616 | 29 | 599 | 0.5975 |
0.6811 |
| AF-C1GUK5-F1-model_v4 | 75 | 616 | 26 | 595 | 0.5973 |
0.6786 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6G9CLF0 | GT83 | 79 | 616 | 1 | 507 | 0.6507 |
0.7303 |
| AF-A0A6G9CLF0-F1-model_v4 | GT83 | 79 | 616 | 1 | 507 | 0.6507 |
0.7303 |
| AF-A0A1B2UBJ7-F1-model_v4 | GT83 | 69 | 616 | 1 | 498 | 0.6507 |
0.7366 |
| AF-A0A7I7YXX7-F1-model_v4 | GT83 | 72 | 616 | 2 | 502 | 0.65 |
0.7324 |
| AF-A0A7I7KEZ8-F1-model_v4 | GT83 | 69 | 616 | 1 | 503 | 0.65 |
0.7307 |
| AF-A0A0H3A237-F1-model_v4 | GT83 | 72 | 616 | 5 | 506 | 0.6496 |
0.7334 |
| AF-A0A7M2XQ70-F1-model_v4 | GT83 | 75 | 616 | 1 | 498 | 0.6496 |
0.7352 |
| AF-I4BE81-F1-model_v4 | GT83 | 72 | 616 | 1 | 501 | 0.6493 |
0.7311 |
| AF-V9XFU7-F1-model_v4 | GT83 | 72 | 616 | 1 | 498 | 0.649 |
0.7346 |
| AF-A0A385LA24-F1-model_v4 | GT83 | 69 | 616 | 1 | 500 | 0.6484 |
0.7314 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E8QA45 | GT83 | 68 | 616 | 10 | 505 | 0.6693 |
0.762 |
| UFS57809.1 | GT83 | 64 | 616 | 9 | 481 | 0.6572 |
0.7637 |
| Q1IJH5 | GT83 | 67 | 615 | 11 | 483 | 0.654 |
0.7615 |
| A0A2X4U042 | GT83 | 69 | 616 | 1 | 508 | 0.6539 |
0.7319 |
| A0A0F0L4U4 | GT83 | 72 | 616 | 4 | 490 | 0.6527 |
0.7449 |
| UCR88156.1 | GT83 | 72 | 616 | 8 | 500 | 0.652 |
0.7434 |
| A0A316B179 | GT83 | 72 | 616 | 17 | 487 | 0.651 |
0.7636 |
| A0A6G9CLF0 | GT83 | 79 | 616 | 1 | 507 | 0.6507 |
0.7303 |
| A0A7T4WKG0 | GT83 | 67 | 614 | 11 | 488 | 0.6491 |
0.7525 |
| A0A4P6EGC6 | GT83 | 74 | 616 | 15 | 490 | 0.6452 |
0.7517 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92521-F1-model_v4 | 4 | 616 | 45 | 546 | 0.6098 |
0.7164 |
| AF-Q1MJ97-F1-model_v4 | 67 | 614 | 1 | 486 | 0.6058 |
0.6956 |
| AF-Q9H6U8-F1-model_v4 | 14 | 616 | 22 | 604 | 0.5966 |
0.6417 |
| AF-Q1MJ96-F1-model_v4 | 78 | 612 | 7 | 488 | 0.5922 |
0.6884 |
| AF-Q1MJ94-F1-model_v4 | 78 | 612 | 7 | 486 | 0.5915 |
0.6888 |
| AF-Q8VDI9-F1-model_v4 | 76 | 616 | 54 | 603 | 0.5825 |
0.6692 |