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Cluster: HRGMv2_2073_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2073_46 HRGMv2_2073_46_7 8631 10772 - GH73
CAZyme HRGMv2_2073_46 HRGMv2_2073_46_8 10769 11776 - GT2
CAZyme HRGMv2_2073_46 HRGMv2_2073_46_9 11773 13092 - GT4
CAZyme HRGMv2_2073_46 HRGMv2_2073_46_10 13095 14564 - GT4
pfam HRGMv2_2073_46 HRGMv2_2073_46_11 14580 15713 - EpsG
CAZyme HRGMv2_2073_46 HRGMv2_2073_46_12 15823 16623 - GT2
NULL(UNKNOWN) HRGMv2_2073_46 HRGMv2_2073_46_13 16620 17819 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2073_46 HRGMv2_2073_46_14 17860 19314 - 9.B.18.1.3
CAZyme HRGMv2_2073_46 HRGMv2_2073_46_15 19324 20085 - GT2
Gene ID: HRGMv2_2073_46_7
Type: CAZyme
Location: 8631 - 10772 (-)
Gene ID: HRGMv2_2073_46_8
Type: CAZyme
Location: 10769 - 11776 (-)
Gene ID: HRGMv2_2073_46_9
Type: CAZyme
Location: 11773 - 13092 (-)
Gene ID: HRGMv2_2073_46_10
Type: CAZyme
Location: 13095 - 14564 (-)
Gene ID: HRGMv2_2073_46_11
Type: pfam
Location: 14580 - 15713 (-)
Gene ID: HRGMv2_2073_46_12
Type: CAZyme
Location: 15823 - 16623 (-)
Gene ID: HRGMv2_2073_46_13
Type:
Location: 16620 - 17819 (-)
Gene ID: HRGMv2_2073_46_14
Type: TC
Location: 17860 - 19314 (-)
Gene ID: HRGMv2_2073_46_15
Type: CAZyme
Location: 19324 - 20085 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2073_46_7 vegetarian > vegan 1.25682 0.00566
HRGMv2_2073_46_8 vegetarian > vegan 1.32733 0.00566
HRGMv2_2073_46_9 vegetarian > vegan 1.17806 0.00566
HRGMv2_2073_46_10 vegetarian > vegan 1.15043 0.00566
HRGMv2_2073_46_11 vegetarian > vegan 1.02511 0.00566
HRGMv2_2073_46_13 vegetarian > vegan 1.11197 0.00566

🧭 Explore Read Mapping of CGC

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