PROTEIN: HRGMv2_2073_46_13
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Protein File & Metadata
Source:
HRGMv2_2073_46_13.pdb
Genome ID:
Protein ID:
HRGMv2_2073_46_13
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Protein Sequence
MEASYGKEPF DLRLLLLRLG RNLWKILALT ILGTVLFGGG YYVKNVLLQP DPGYAASSTY 60 KVEYVENPNA AGAYYINEAT WNSLLHTGEF LDGVETHLQE AAERGETGAA AVLEQGRDRW 120 IKALSAALPS DFSIPVTKAT TQDPGESIAL AHAAEETMCG EFAESMPEIT RIKVLDHGDL 180 AEAVVPDVRP VRAVILAAVL SLFFVVVIFL LWELSRDSIW LPATLRRRYG LHSLGTVEST 240 GFAENVKYLL EKTNAHKIAV CGALPEADPQ ETVDRLRELQ PAGREQTSGR VQPIDREWIA 300 VPSPLLCPES AETLRAADVV LLAVPAGATV GKRLEAVLEY LTAQDCKVDG AFLWNADETL 360 IRSYYFLPMI GSDTADNNMN TRNTEMEHTK TTQAEGEQA 399
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EV96-F1-model_v4 | 9 | 360 | 1 | 417 | 0.5746 |
0.6838 |
| AF-K0EZX4-F1-model_v4 | 10 | 379 | 1 | 446 | 0.5675 |
0.66 |
| AF-A0A0H3GVU7-F1-model_v4 | 4 | 377 | 11 | 717 | 0.5454 |
0.7486 |
| AF-P38134-F1-model_v4 | 4 | 377 | 12 | 725 | 0.5387 |
0.7418 |
| AF-Q32HS6-F1-model_v4 | 6 | 377 | 14 | 725 | 0.5319 |
0.7352 |
| AF-Q9I1N4-F1-model_v4 | 6 | 368 | 1 | 653 | 0.5204 |
0.7119 |
| AF-Q8CYN1-F1-model_v4 | 5 | 358 | 1 | 344 | 0.5023 |
0.5616 |
| AF-Q9F7B1-F1-model_v4 | 7 | 366 | 12 | 703 | 0.4676 |
0.6607 |
| AF-P76387-F1-model_v4 | 8 | 367 | 14 | 705 | 0.4584 |
0.6489 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2L0WKS9 | GT0 | 1 | 393 | 3 | 790 | 0.4767 |
0.7094 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 1 | 393 | 3 | 790 | 0.4767 |
0.7094 |
| AF-A0A8B0SMZ4-F1-model_v4 | GT4 | 4 | 380 | 417 | 1125 | 0.4611 |
0.7204 |
| WGH78710.1 | PL1_2 | 1 | 375 | 25 | 698 | 0.4398 |
0.6916 |
| AF-A0A7H8KQB2-F1-model_v4 | GT4 | 12 | 392 | 1 | 551 | 0.3812 |
0.566 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WGH78710.1 | PL1_2 | 1 | 375 | 25 | 698 | 0.4398 |
0.6916 |
| A0A7H8KQB2 | GT4 | 12 | 392 | 1 | 551 | 0.3812 |
0.566 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7nib-assembly1.cif.gz_F | 10 | 373 | 1 | 513 | 0.5572 |
0.6937 |
| 7nib-assembly1.cif.gz_E | 10 | 373 | 1 | 518 | 0.5525 |
0.6903 |
| 7nhs-assembly1.cif.gz_A | 10 | 377 | 1 | 522 | 0.5331 |
0.6621 |
| 7nhr-assembly1.cif.gz_G | 10 | 377 | 1 | 564 | 0.5247 |
0.6711 |
| 7nii-assembly1.cif.gz_H | 10 | 375 | 1 | 564 | 0.5149 |
0.6621 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48452-F1-model_v4 | 8 | 377 | 11 | 721 | 0.5451 |
0.7566 |
| AF-P58764-F1-model_v4 | 6 | 377 | 14 | 725 | 0.539 |
0.7448 |
| AF-P38134-F1-model_v4 | 4 | 377 | 12 | 725 | 0.5387 |
0.7418 |
| AF-Q8XC28-F1-model_v4 | 6 | 377 | 14 | 725 | 0.5366 |
0.742 |
| AF-Q46631-F1-model_v4 | 8 | 377 | 15 | 723 | 0.5366 |
0.7461 |
| AF-Q45409-F1-model_v4 | 8 | 380 | 15 | 739 | 0.5351 |
0.7477 |
| AF-P58593-F1-model_v4 | 8 | 384 | 15 | 743 | 0.5307 |
0.7346 |
| AF-Q8Z5G6-F1-model_v4 | 7 | 366 | 13 | 703 | 0.474 |
0.6706 |
| AF-Q9F7B1-F1-model_v4 | 7 | 366 | 12 | 703 | 0.4676 |
0.6607 |
| AF-P76387-F1-model_v4 | 8 | 367 | 14 | 705 | 0.4584 |
0.6489 |