dbCAN Logo

Cluster: HRGMv2_1962_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1962_4 HRGMv2_1962_4_85 92125 92733 + 9.B.158.1.1
NULL(UNKNOWN) HRGMv2_1962_4 HRGMv2_1962_4_86 92768 94117 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1962_4 HRGMv2_1962_4_87 94221 95597 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1962_4 HRGMv2_1962_4_88 95740 96534 - 3.A.1.34.1
TC HRGMv2_1962_4 HRGMv2_1962_4_89 96534 97619 - 3.A.1.34.1
pfam HRGMv2_1962_4 HRGMv2_1962_4_90 97616 98512 - ABC_sub_bind
pfam HRGMv2_1962_4 HRGMv2_1962_4_91 98523 99440 - ABC_sub_bind
CAZyme HRGMv2_1962_4 HRGMv2_1962_4_92 99437 101278 - GH13_14
Gene ID: HRGMv2_1962_4_85
Type: TC
Location: 92125 - 92733 (+)
Gene ID: HRGMv2_1962_4_86
Type:
Location: 92768 - 94117 (-)
Gene ID: HRGMv2_1962_4_87
Type:
Location: 94221 - 95597 (-)
Gene ID: HRGMv2_1962_4_88
Type: TC
Location: 95740 - 96534 (-)
Gene ID: HRGMv2_1962_4_89
Type: TC
Location: 96534 - 97619 (-)
Gene ID: HRGMv2_1962_4_90
Type: pfam
Location: 97616 - 98512 (-)
Gene ID: HRGMv2_1962_4_91
Type: pfam
Location: 98523 - 99440 (-)
Gene ID: HRGMv2_1962_4_92
Type: CAZyme
Location: 99437 - 101278 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List