PROTEIN: HRGMv2_1962_4_86
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Protein File & Metadata
Source:
HRGMv2_1962_4_86.pdb
Genome ID:
Protein ID:
HRGMv2_1962_4_86
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Protein Sequence
MKRSLLLSTL LLSLYSLASI TNGSIEFYND NEHSFYSKKN SLKITDLGFR TNITKNGLTI 60 GANLKFDDFY PQTSDKDDTF SNFVNNSKIY AKYEKSFEDT TTSLKISFNP NMTKNQEDKN 120 VLIGNIKVKG KVELTHNDLN AGFSSKTVFP FKNCDQDTCP KYGANVFSKN DLYLNGDTKY 180 IKDIDTKLEF YNSYSGTKDS LKYISTAFSA SYSPIDNLKL DIASNFKYQF NDALDFEDIY 240 TGTKRFTDKV DDYLTNNTDF CLYQNNASYF QSHNLGIEYT GLDKFDFKIN NYVNHLKCKN 300 IFGIKNALSY GDEFNTTYTP IDNLTLSAYT YLGGVSLLSE SHKPLNIGLF EINLGTKYDY 360 FPIDEITLSP SLNVATYFGI TKSTFNLAKL AAAPTLELDP RLEFDYTLIN KLNITASAET 420 PITFIILKDK KFGFHDANIK TSLDIKYEW 449
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P80672-F1-model_v4 | 2 | 448 | 1 | 424 | 0.585 |
0.6182 |
| AF-A0A0H3GV90-F1-model_v4 | 21 | 449 | 34 | 421 | 0.5629 |
0.6414 |
| AF-P32722-F1-model_v4 | 20 | 449 | 40 | 442 | 0.5566 |
0.6263 |
| AF-A0A0H3GV29-F1-model_v4 | 1 | 444 | 6 | 459 | 0.5391 |
0.5673 |
| AF-P43839-F1-model_v4 | 22 | 448 | 33 | 359 | 0.5337 |
0.6578 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1ALA8 | CBM9 | 8 | 448 | 238 | 796 | 0.49 |
0.6452 |
| A0A1E3V254 | CBM0 | 15 | 449 | 167 | 785 | 0.4587 |
0.6048 |
| AF-A0A0K2SH33-F1-model_v4 | CBM50 | 1 | 444 | 256 | 674 | 0.3835 |
0.5773 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1ALA8 | CBM9 | 8 | 448 | 238 | 796 | 0.49 |
0.6452 |
| A0A0K2SH33 | CBM50 | 1 | 444 | 256 | 674 | 0.3835 |
0.5773 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5dl6-assembly1.cif.gz_A | 19 | 449 | 6 | 394 | 0.5917 |
0.6523 |
| 4frt-assembly1.cif.gz_A | 21 | 449 | 2 | 369 | 0.5914 |
0.6641 |
| 5dl8-assembly2.cif.gz_A | 21 | 449 | 8 | 391 | 0.5844 |
0.648 |
| 5ldv-assembly1.cif.gz_A | 18 | 448 | 10 | 403 | 0.5764 |
0.6351 |
| 4aui-assembly1.cif.gz_C | 22 | 448 | 3 | 308 | 0.5568 |
0.6729 |
| 3a2s-assembly1.cif.gz_X | 22 | 448 | 3 | 341 | 0.544 |
0.6332 |
| 5mdo-assembly1.cif.gz_A | 22 | 448 | 12 | 341 | 0.5284 |
0.6303 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P32722-F1-model_v4 | 20 | 449 | 40 | 442 | 0.5566 |
0.6263 |
| AF-Q2SQ17-F1-model_v4 | 19 | 448 | 28 | 398 | 0.5508 |
0.6385 |
| AF-P29739-F1-model_v4 | 23 | 448 | 33 | 326 | 0.5397 |
0.6949 |
| AF-Q48217-F1-model_v4 | 22 | 448 | 32 | 361 | 0.5373 |
0.6572 |
| AF-P0DSN2-F1-model_v4 | 3 | 439 | 87 | 685 | 0.5367 |
0.6763 |
| AF-P43839-F1-model_v4 | 22 | 448 | 33 | 359 | 0.5337 |
0.6578 |
| AF-Q48219-F1-model_v4 | 22 | 448 | 32 | 367 | 0.5332 |
0.6462 |
| AF-P20149-F1-model_v4 | 22 | 448 | 33 | 361 | 0.5323 |
0.6541 |
| AF-Q48221-F1-model_v4 | 22 | 449 | 34 | 353 | 0.531 |
0.6618 |
| AF-Q48218-F1-model_v4 | 22 | 448 | 32 | 369 | 0.5293 |
0.6401 |