PROTEIN: HRGMv2_1962_4_87
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Protein File & Metadata
Source:
HRGMv2_1962_4_87.pdb
Genome ID:
Protein ID:
HRGMv2_1962_4_87
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Protein Sequence
MKKSLLLSTL ILSLCSLANK TKGSIEFYNN NKHSFEKTEN LFNIKNLGVK ASITKNEFTI 60 GANLKFKDLY PTESNKLDVM YNFANKSKIY AKYEKSFGDT TPSLKISFNP DVQPNKDDKP 120 ILIGDIKVKG KVELKRDDIN VGISSQTTFP FENFDKIKDF PQGQLSYKDT VLSKHDLYLN 180 GNTKHIKDIK AKLELCNSYS EPPYSLKYLF ATLSANYSPI NTLKLDLASN FKYQFNDGLD 240 FEKQYTGTKR FINKIDIFLK NISGQGIYQQ QASYFQSHNL GIEYTGLNKF DFKINNYVNH 300 INSKTVLGTN NTLSYGNEFN ATYMPIDNLT LSAYTHLGGM SLLSNTDKIH FGLFELNLGT 360 KYDYKPIKQL TISPEFNVAS YFGITKANPL FKHLICAPAL ELTPKLAFNY SPLNKLNIKA 420 SVETPTTFTM LITNKPNYYK FGFNNTIIKS AFNVKYEW 458
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P80672-F1-model_v4 | 5 | 457 | 1 | 424 | 0.572 |
0.6092 |
| AF-A0A0H3GLX3-F1-model_v4 | 1 | 455 | 7 | 460 | 0.557 |
0.5803 |
| AF-Q47706-F1-model_v4 | 20 | 458 | 31 | 420 | 0.5532 |
0.6325 |
| AF-A0A0H3GV29-F1-model_v4 | 12 | 455 | 16 | 459 | 0.536 |
0.5695 |
| AF-P43839-F1-model_v4 | 22 | 457 | 33 | 359 | 0.5315 |
0.6586 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1E3V254 | CBM0 | 17 | 458 | 167 | 785 | 0.4515 |
0.5935 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1ALA8 | CBM9 | 2 | 457 | 242 | 796 | 0.4897 |
0.633 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2y0h-assembly1.cif.gz_A | 19 | 458 | 2 | 361 | 0.5962 |
0.6808 |
| 3t20-assembly1.cif.gz_A | 20 | 458 | 6 | 361 | 0.5869 |
0.678 |
| 5dl8-assembly2.cif.gz_A | 20 | 458 | 8 | 391 | 0.5763 |
0.6448 |
| 5dl6-assembly1.cif.gz_A | 19 | 458 | 6 | 394 | 0.5736 |
0.6392 |
| 5mdo-assembly1.cif.gz_A | 22 | 457 | 11 | 341 | 0.5296 |
0.6346 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P80672-F1-model_v4 | 5 | 457 | 1 | 424 | 0.572 |
0.6092 |
| AF-Q47706-F1-model_v4 | 20 | 458 | 31 | 420 | 0.5532 |
0.6325 |
| AF-Q48221-F1-model_v4 | 22 | 457 | 33 | 353 | 0.5414 |
0.6773 |
| AF-P29739-F1-model_v4 | 23 | 457 | 33 | 326 | 0.5366 |
0.6976 |
| AF-Q48216-F1-model_v4 | 22 | 457 | 33 | 360 | 0.5316 |
0.6594 |
| AF-Q48217-F1-model_v4 | 22 | 457 | 33 | 361 | 0.5316 |
0.6579 |
| AF-P43839-F1-model_v4 | 22 | 457 | 33 | 359 | 0.5315 |
0.6586 |
| AF-P20149-F1-model_v4 | 22 | 457 | 33 | 361 | 0.5314 |
0.6576 |
| AF-Q48218-F1-model_v4 | 20 | 457 | 23 | 369 | 0.5279 |
0.6292 |
| AF-Q48219-F1-model_v4 | 20 | 457 | 23 | 367 | 0.5279 |
0.6303 |