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Cluster: HRGMv2_1913_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1913_7 HRGMv2_1913_7_10 8998 10587 - 3.A.1.121.4
pfam HRGMv2_1913_7 HRGMv2_1913_7_11 11176 11898 - TM1586_NiRdase
pfam HRGMv2_1913_7 HRGMv2_1913_7_12 11892 12698 - PHP
TC HRGMv2_1913_7 HRGMv2_1913_7_13 12741 13616 - 2.A.115.1.1
CAZyme HRGMv2_1913_7 HRGMv2_1913_7_14 13821 15275 - GH1
NULL(UNKNOWN) HRGMv2_1913_7 HRGMv2_1913_7_15 15303 16220 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1913_7 HRGMv2_1913_7_16 16236 17096 - 2.A.115.1.2
pfam HRGMv2_1913_7 HRGMv2_1913_7_17 17112 17453 - PTS_IIA
TC HRGMv2_1913_7 HRGMv2_1913_7_18 17478 18707 - 4.A.3.2.3
Gene ID: HRGMv2_1913_7_10
Type: TC
Location: 8998 - 10587 (-)
Gene ID: HRGMv2_1913_7_11
Type: pfam
Location: 11176 - 11898 (-)
Gene ID: HRGMv2_1913_7_12
Type: pfam
Location: 11892 - 12698 (-)
Gene ID: HRGMv2_1913_7_13
Type: TC
Location: 12741 - 13616 (-)
Gene ID: HRGMv2_1913_7_14
Type: CAZyme
Location: 13821 - 15275 (-)
Gene ID: HRGMv2_1913_7_15
Type:
Location: 15303 - 16220 (-)
Gene ID: HRGMv2_1913_7_16
Type: TC
Location: 16236 - 17096 (-)
Gene ID: HRGMv2_1913_7_17
Type: pfam
Location: 17112 - 17453 (-)
Gene ID: HRGMv2_1913_7_18
Type: TC
Location: 17478 - 18707 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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