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PROTEIN: HRGMv2_1913_7_15

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Protein File & Metadata
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Source:
HRGMv2_1913_7_15.pdb
Genome ID:
HRGMv2_1913
Protein ID:
HRGMv2_1913_7_15

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRMLSSTAS   ELLNMSKEEK   LTAIQSSEGR   IIVSEMTMNG   APDALDNASI   GELYAAFGAD 60
MLLLNKFDVF   HPFIQNIDGT   NSDDCIHTLR   SYTGKLVGLN   LEPVPDSSDL   KTEQVQLCKG 120
RMATVEAAEK   AVQLGVDYIV   LTGNPDTGVT   NAAMIEATKK   LKEAVGDKVI   LIAGKMHAAG 180
CLKEAGANII   SKDTIKALVS   AGADIILLPA   PGTVPGITLD   YVCDLVSYCH   SLEVMTLTAI 240
GTSQEDADTE   TLRHIALLCK   MSGTDLHHIG   DAGHAGCIAE   SIMTYSIVIR   GKRHTYNRMA 300
TSVLR 305
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132P1I0-F1-model_v4 1 305 2 308 0.9316 0.9459
AF-P66921-F1-model_v4 21 291 1 207 0.659 0.8077
AF-K0FDM2-F1-model_v4 31 292 1 208 0.6467 0.7861
AF-A0A0D2ELW1-F1-model_v4 15 305 2 292 0.6403 0.6793
AF-A0A2R8QH61-F1-model_v4 3 294 1 252 0.6369 0.715
AF-Q9NTM9-F1-model_v4 13 294 12 273 0.6363 0.7168
AF-A0A133CU02-F1-model_v4 3 288 1 214 0.6363 0.7765
AF-Q8ZL21-F1-model_v4 9 299 1 285 0.6358 0.6828
AF-X8EYX0-F1-model_v4 5 293 7 226 0.6357 0.7669
AF-K0F7X7-F1-model_v4 10 290 1 274 0.6345 0.6893
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0D5A5Q1-F1-model_v4 GH39 8 297 21 357 0.6298 0.7331
A0A1Q4HCP1 GH39 6 295 26 357 0.6156 0.7161
AF-A0A1P8XJ68-F1-model_v4 GH39 6 296 17 340 0.6116 0.6956
AF-A0A7I7XP24-F1-model_v4 GH39 10 295 32 357 0.6104 0.7184
AF-A0A3G9AAM0-F1-model_v4 GH39 25 295 34 359 0.6064 0.7516
AF-A0A6H0KJA5-F1-model_v4 GH18 7 297 39 310 0.6045 0.7008
AF-A0A7I7ZRI7-F1-model_v4 GH39 12 295 33 357 0.6044 0.7154
AF-A0A0D5ADU3-F1-model_v4 GH39 5 288 29 344 0.6039 0.7041
A0A3Q9FR09 GH26 14 301 37 374 0.6038 0.7223
AF-A0A3Q9FR09-F1-model_v4 GH26 14 301 37 374 0.6038 0.7223
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1Q4HCP1 GH39 6 295 26 357 0.6156 0.7161
A0A7I7XEU1 GH39 9 295 38 369 0.6143 0.7308
U5EJF7 GH39 26 298 33 356 0.6137 0.7514
A0A1W5LFL7 GH13 26 295 10 325 0.6074 0.7224
A0A0D5ADU3 GH39 5 288 29 344 0.6039 0.7041
A0A3Q9FR09 GH26 14 301 37 374 0.6038 0.7223
A0A1H6IU47 GH39 10 295 38 359 0.5957 0.7019
A0A1Z4PZ02 GH39 22 294 38 327 0.5939 0.7009
A0A9E8CWP4 GH26 27 301 1 276 0.5904 0.6457
A0A7S8IET5 GH39 21 305 42 405 0.5894 0.7316
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2qjg-assembly1.cif.gz_A 1 296 1 266 0.6716 0.747
1xi3-assembly1.cif.gz_B 20 294 1 202 0.6707 0.824
2qjg-assembly2.cif.gz_H 1 299 1 265 0.6687 0.7407
2qjg-assembly2.cif.gz_G 1 295 1 261 0.6683 0.7506
2qjg-assembly1.cif.gz_E 1 299 1 265 0.668 0.7412
2qjg-assembly1.cif.gz_L 1 299 1 266 0.668 0.7402
2qjg-assembly2.cif.gz_R 1 296 1 263 0.6679 0.7458
2qjg-assembly2.cif.gz_T 1 296 1 261 0.6679 0.7493
2qjg-assembly1.cif.gz_K 1 296 1 260 0.6655 0.7477
3pm6-assembly1.cif.gz_B 14 301 3 264 0.6475 0.7186
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B1VTI8-F1-model_v4 1 294 1 259 0.6766 0.7725
AF-A0JC77-F1-model_v4 1 294 1 259 0.6762 0.7724
AF-B8I3J4-F1-model_v4 16 292 1 209 0.6686 0.8114
AF-A6M1W6-F1-model_v4 16 291 1 208 0.6664 0.8111
AF-B2UY65-F1-model_v4 16 291 1 208 0.6594 0.8052
AF-Q9HRI2-F1-model_v4 17 293 1 254 0.6583 0.7531
AF-A3CS45-F1-model_v4 23 294 1 208 0.6529 0.798
AF-Q0W1L8-F1-model_v4 20 294 1 208 0.6525 0.7998
AF-A4F727-F1-model_v4 10 290 1 223 0.6521 0.773
AF-Q8KEJ1-F1-model_v4 2 294 1 232 0.6431 0.7892
Download Full SwissProt Results