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Cluster: HRGMv2_1813_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_27 HRGMv2_1813_27_44 38083 39480 + 5.B.3.1.1
pfam HRGMv2_1813_27 HRGMv2_1813_27_45 39652 40077 + Usp
CAZyme HRGMv2_1813_27 HRGMv2_1813_27_46 40127 42499 - GH63
NULL(UNKNOWN) HRGMv2_1813_27 HRGMv2_1813_27_47 42518 43702 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1813_27 HRGMv2_1813_27_48 43967 44947 + LacI
CAZyme HRGMv2_1813_27 HRGMv2_1813_27_49 45135 48230 + GH2
pfam HRGMv2_1813_27 HRGMv2_1813_27_50 48227 48679 + DUF386
TC HRGMv2_1813_27 HRGMv2_1813_27_51 48932 50422 + 2.A.3.7.4
TF HRGMv2_1813_27 HRGMv2_1813_27_52 50837 51955 + HTH_11
pfam HRGMv2_1813_27 HRGMv2_1813_27_53 51952 52890 + Indigoidine_A
TC HRGMv2_1813_27 HRGMv2_1813_27_54 53063 54334 + 2.A.41.2.9
Gene ID: HRGMv2_1813_27_44
Type: TC
Location: 38083 - 39480 (+)
Gene ID: HRGMv2_1813_27_45
Type: pfam
Location: 39652 - 40077 (+)
Gene ID: HRGMv2_1813_27_46
Type: CAZyme
Location: 40127 - 42499 (-)
Gene ID: HRGMv2_1813_27_47
Type:
Location: 42518 - 43702 (-)
Gene ID: HRGMv2_1813_27_48
Type: TF
Location: 43967 - 44947 (+)
Gene ID: HRGMv2_1813_27_49
Type: CAZyme
Location: 45135 - 48230 (+)
Gene ID: HRGMv2_1813_27_50
Type: pfam
Location: 48227 - 48679 (+)
Gene ID: HRGMv2_1813_27_51
Type: TC
Location: 48932 - 50422 (+)
Gene ID: HRGMv2_1813_27_52
Type: TF
Location: 50837 - 51955 (+)
Gene ID: HRGMv2_1813_27_53
Type: pfam
Location: 51952 - 52890 (+)
Gene ID: HRGMv2_1813_27_54
Type: TC
Location: 53063 - 54334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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