PROTEIN: HRGMv2_1813_27_47
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Protein File & Metadata
Source:
HRGMv2_1813_27_47.pdb
Genome ID:
Protein ID:
HRGMv2_1813_27_47
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Protein Sequence
MRRYFYLLPG NGADPHGVNG SSWRVPRRLA IDPNPMRVQM KIKSNNKILP TLLLILPLPL 60 LAQESVVPAE HNVLPPPELT NTGPTTLRFY GELGIGGSVY LNGEHQHKYS DGTYIEGGLE 120 IKHGHWFGLL YGEGWTVQAD HQGNAWTPDH SWGGFEGGIN RFYAGYRTDD GTEMMLSLRN 180 DSSLDDLQWW ADFTPEYGYV IPNTRDLTYA AKLQNLTGKF RYSLTAAPES RIDESKALLH 240 FGKYDRYSDK YRYRAMVNGY TQYDLQEGLT LLNGLEITDG MGQLYLLGLK GKNLAGRVWQ 300 HTGKGDGNHP GSESGLMLSA MVEAAKGLYF STAYSYARHR LDNAPDTATS YAQAGIWYEY 360 AGGKLATALD SKFYMTNDST DASNSVFLMQ YFYW 394
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 42 | 394 | 2 | 356 | 0.9079 |
0.9689 |
| AF-P37432-F1-model_v4 | 1 | 394 | 10 | 363 | 0.7126 |
0.7728 |
| AF-Q9I0X7-F1-model_v4 | 64 | 394 | 11 | 445 | 0.5642 |
0.7176 |
| AF-P32722-F1-model_v4 | 1 | 394 | 5 | 440 | 0.5579 |
0.609 |
| AF-Q9I0E2-F1-model_v4 | 1 | 394 | 6 | 431 | 0.5537 |
0.5992 |
| AF-Q9I083-F1-model_v4 | 80 | 394 | 27 | 422 | 0.5508 |
0.7169 |
| AF-Q9I5H4-F1-model_v4 | 21 | 394 | 7 | 424 | 0.5455 |
0.6125 |
| AF-P26218-F1-model_v4 | 77 | 394 | 116 | 538 | 0.5069 |
0.7204 |
| AF-G3XDA5-F1-model_v4 | 81 | 394 | 25 | 458 | 0.4961 |
0.6696 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6ehb-assembly1.cif.gz_C | 2 | 394 | 1 | 320 | 0.7208 |
0.8063 |
| 6ehb-assembly1.cif.gz_B | 2 | 394 | 1 | 317 | 0.7191 |
0.808 |
| 5onu-assembly1.cif.gz_C | 2 | 394 | 1 | 319 | 0.7141 |
0.8017 |
| 5o77-assembly1.cif.gz_A | 77 | 394 | 1 | 337 | 0.7125 |
0.8243 |
| 3nsg-assembly1.cif.gz_C | 76 | 394 | 1 | 341 | 0.7122 |
0.8261 |
| 5o78-assembly1.cif.gz_C | 83 | 394 | 1 | 331 | 0.7122 |
0.8306 |
| 4kr4-assembly1.cif.gz_B | 76 | 394 | 1 | 340 | 0.712 |
0.8246 |
| 4kra-assembly1.cif.gz_B | 76 | 394 | 1 | 340 | 0.7118 |
0.8246 |
| 4kr8-assembly1.cif.gz_B | 76 | 394 | 1 | 340 | 0.7113 |
0.8236 |
| 3upg-assembly1.cif.gz_A | 76 | 394 | 1 | 311 | 0.711 |
0.8073 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 42 | 394 | 2 | 356 | 0.9079 |
0.9689 |
| AF-P29739-F1-model_v4 | 1 | 394 | 10 | 326 | 0.7168 |
0.8164 |
| AF-Q56113-F1-model_v4 | 1 | 394 | 10 | 363 | 0.7131 |
0.7735 |
| AF-P37432-F1-model_v4 | 1 | 394 | 10 | 363 | 0.7126 |
0.7728 |
| AF-A0A0H3N9T8-F1-model_v4 | 1 | 394 | 10 | 363 | 0.7126 |
0.773 |
| AF-A0A4P7TN82-F1-model_v4 | 1 | 394 | 10 | 362 | 0.7058 |
0.7679 |
| AF-O54340-F1-model_v4 | 1 | 394 | 13 | 343 | 0.7045 |
0.7921 |
| AF-Q48221-F1-model_v4 | 1 | 394 | 12 | 353 | 0.7029 |
0.7777 |
| AF-P57440-F1-model_v4 | 1 | 394 | 10 | 382 | 0.6942 |
0.7362 |
| AF-Q48219-F1-model_v4 | 1 | 394 | 13 | 367 | 0.6837 |
0.7432 |