dbCAN Logo

Cluster: HRGMv2_1754_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1754_6 HRGMv2_1754_6_56 53241 54656 - 9.B.18.1.2
CAZyme HRGMv2_1754_6 HRGMv2_1754_6_57 54667 55437 - GT111
CAZyme HRGMv2_1754_6 HRGMv2_1754_6_58 55439 56365 - GT2
pfam HRGMv2_1754_6 HRGMv2_1754_6_59 56440 57588 - Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_1754_6 HRGMv2_1754_6_60 57602 59356 - GT2
NULL(UNKNOWN) HRGMv2_1754_6 HRGMv2_1754_6_61 59359 61293 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1754_6 HRGMv2_1754_6_62 61301 62071 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1754_6 HRGMv2_1754_6_63 62177 62908 - 3.A.1.103.1
TC HRGMv2_1754_6 HRGMv2_1754_6_64 62908 63699 - 3.A.1.103.4
Gene ID: HRGMv2_1754_6_56
Type: TC
Location: 53241 - 54656 (-)
Gene ID: HRGMv2_1754_6_57
Type: CAZyme
Location: 54667 - 55437 (-)
Gene ID: HRGMv2_1754_6_58
Type: CAZyme
Location: 55439 - 56365 (-)
Gene ID: HRGMv2_1754_6_59
Type: pfam
Location: 56440 - 57588 (-)
Gene ID: HRGMv2_1754_6_60
Type: CAZyme
Location: 57602 - 59356 (-)
Gene ID: HRGMv2_1754_6_61
Type:
Location: 59359 - 61293 (-)
Gene ID: HRGMv2_1754_6_62
Type:
Location: 61301 - 62071 (-)
Gene ID: HRGMv2_1754_6_63
Type: TC
Location: 62177 - 62908 (-)
Gene ID: HRGMv2_1754_6_64
Type: TC
Location: 62908 - 63699 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List