PROTEIN: HRGMv2_1754_6_62
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Protein File & Metadata
Source:
HRGMv2_1754_6_62.pdb
Genome ID:
Protein ID:
HRGMv2_1754_6_62
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Protein Sequence
MSNKTAIVIR TFSGRDRFFK RICDSIFNQT FSDKIVCVLN VGDDSFSYDE VFDADRAIYY 60 TSDASELFNY LDKEEVKYIS VLDDDDSLSP EFYSRLISVI VNKKICHSAK AITTHVNKVF 120 EYVENNRIRI SRTEPLNHHL KNGLLPLDTL RYRDVLEISS FIFDYNSFKD LVFMHDLKDP 180 AFFWPFIIHF GLNFDIFILE EAMVFKHIRE VSSYSEDNFT HREQSKYNNY LRIKFHELYR 240 IQNVGLNNFM CNLLFS 256
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU9-F1-model_v4 | 1 | 256 | 1 | 262 | 0.9011 |
0.95 |
| AF-Q0P9A9-F1-model_v4 | 2 | 256 | 1 | 257 | 0.7491 |
0.7989 |
| AF-K0F1F2-F1-model_v4 | 1 | 256 | 1 | 254 | 0.742 |
0.8027 |
| AF-Q57022-F1-model_v4 | 1 | 256 | 2 | 239 | 0.7323 |
0.8006 |
| AF-O24928-F1-model_v4 | 2 | 256 | 1 | 238 | 0.7228 |
0.8027 |
| AF-K0EVS3-F1-model_v4 | 2 | 256 | 1 | 253 | 0.718 |
0.7854 |
| AF-Q48215-F1-model_v4 | 3 | 256 | 1 | 245 | 0.7177 |
0.7898 |
| AF-H9L431-F1-model_v4 | 1 | 256 | 3 | 269 | 0.7135 |
0.7664 |
| AF-Q0P9B5-F1-model_v4 | 2 | 256 | 1 | 287 | 0.7133 |
0.7952 |
| AF-P77414-F1-model_v4 | 1 | 256 | 2 | 268 | 0.7132 |
0.7654 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QAT94681.1 | GT2 | 1 | 256 | 1 | 256 | 0.9713 |
0.9805 |
| A0A380AAY7 | GT0 | 1 | 256 | 1 | 265 | 0.9033 |
0.9576 |
| AF-Q8ZQU9-F1-model_v4 | GT0 | 1 | 256 | 1 | 262 | 0.9006 |
0.9496 |
| A0A9Q6EPN0 | GT0 | 2 | 256 | 1 | 264 | 0.8978 |
0.9555 |
| AF-A0A0H3NJ37-F1-model_v4 | GT0 | 1 | 256 | 1 | 266 | 0.8927 |
0.9425 |
| A0A735PWJ1 | GT2 | 1 | 256 | 1 | 266 | 0.8859 |
0.9363 |
| AF-A0A6C7I886-F1-model_v4 | GT0 | 1 | 256 | 1 | 266 | 0.8839 |
0.9345 |
| AF-A0A0F6AYM5-F1-model_v4 | GT0 | 1 | 256 | 1 | 266 | 0.8838 |
0.9344 |
| AF-Q8Z8D4-F1-model_v4 | GT0 | 1 | 256 | 1 | 266 | 0.8835 |
0.9341 |
| AF-A0A3Z6P3A1-F1-model_v4 | GT0 | 1 | 256 | 1 | 266 | 0.8834 |
0.9341 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QAT94681.1 | GT2 | 1 | 256 | 1 | 256 | 0.9713 |
0.9805 |
| A0A735PWJ1 | GT2 | 1 | 256 | 1 | 266 | 0.8859 |
0.9363 |
| A0A286ED70 | GT2 | 2 | 256 | 1 | 271 | 0.8245 |
0.8745 |
| V6F8Z8 | GT2 | 2 | 256 | 7 | 271 | 0.7864 |
0.8575 |
| A0A1B2E2J9 | GT2 | 1 | 256 | 1 | 263 | 0.7851 |
0.8521 |
| AUO06973.1 | GT2 | 1 | 256 | 3 | 268 | 0.7843 |
0.8427 |
| A0A2S2E0S6 | GT2 | 3 | 256 | 1 | 264 | 0.7834 |
0.8701 |
| A8FXP0 | GT2 | 2 | 256 | 1 | 267 | 0.7805 |
0.8584 |
| APW46537.1 | GT2 | 2 | 256 | 1 | 265 | 0.7792 |
0.8585 |
| WDI32483.1 | GT2 | 2 | 256 | 1 | 262 | 0.7781 |
0.8424 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6p61-assembly3.cif.gz_C | 1 | 209 | 1 | 190 | 0.7077 |
0.8296 |
| 6p61-assembly2.cif.gz_B | 1 | 208 | 1 | 191 | 0.7065 |
0.8264 |
| 5hea-assembly1.cif.gz_A | 2 | 256 | 1 | 242 | 0.7027 |
0.7904 |
| 1h7q-assembly1.cif.gz_A | 2 | 250 | 1 | 239 | 0.7018 |
0.7493 |
| 1h7l-assembly1.cif.gz_A | 2 | 250 | 1 | 238 | 0.7 |
0.7488 |
| 1qgs-assembly1.cif.gz_A | 2 | 250 | 1 | 237 | 0.6993 |
0.7494 |
| 6h1j-assembly1.cif.gz_C | 2 | 256 | 1 | 247 | 0.6501 |
0.7575 |
| 5tzj-assembly1.cif.gz_C | 3 | 256 | 1 | 294 | 0.6499 |
0.7709 |
| 6h21-assembly1.cif.gz_B | 1 | 256 | 1 | 248 | 0.6498 |
0.7548 |
| 6h4m-assembly2.cif.gz_H | 2 | 256 | 1 | 252 | 0.6498 |
0.7479 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4KXC9-F1-model_v4 | 1 | 256 | 5 | 246 | 0.7554 |
0.8196 |
| AF-O32268-F1-model_v4 | 1 | 256 | 4 | 242 | 0.7365 |
0.8057 |
| AF-Q57022-F1-model_v4 | 1 | 256 | 2 | 239 | 0.7323 |
0.8006 |
| AF-P39614-F1-model_v4 | 3 | 256 | 1 | 244 | 0.7257 |
0.7986 |
| AF-Q46635-F1-model_v4 | 3 | 256 | 1 | 244 | 0.7209 |
0.7936 |
| AF-Q077R2-F1-model_v4 | 2 | 256 | 1 | 232 | 0.7191 |
0.8064 |
| AF-Q03084-F1-model_v4 | 1 | 256 | 4 | 251 | 0.719 |
0.7924 |
| AF-B5L3F2-F1-model_v4 | 1 | 256 | 2 | 235 | 0.7186 |
0.8026 |
| AF-Q48215-F1-model_v4 | 3 | 256 | 1 | 245 | 0.7177 |
0.7898 |
| AF-P39621-F1-model_v4 | 2 | 252 | 1 | 256 | 0.7161 |
0.7532 |