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Cluster: HRGMv2_1486_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1486_54 HRGMv2_1486_54_2 1359 1889 + 4.A.1.2.5
pfam HRGMv2_1486_54 HRGMv2_1486_54_3 1896 2762 + PRD | PRD | CAT_RBD
TC HRGMv2_1486_54 HRGMv2_1486_54_4 2862 4478 + 4.A.1.1.3
CAZyme HRGMv2_1486_54 HRGMv2_1486_54_5 4482 5864 + GH4
STP HRGMv2_1486_54 HRGMv2_1486_54_6 6121 7953 + Pyr_redox_2
TC HRGMv2_1486_54 HRGMv2_1486_54_7 7947 9758 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1486_54 HRGMv2_1486_54_8 9761 10813 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1486_54 HRGMv2_1486_54_9 10817 12193 + 3.A.1.17.10
Gene ID: HRGMv2_1486_54_2
Type: TC
Location: 1359 - 1889 (+)
Gene ID: HRGMv2_1486_54_3
Type: pfam
Location: 1896 - 2762 (+)
Gene ID: HRGMv2_1486_54_4
Type: TC
Location: 2862 - 4478 (+)
Gene ID: HRGMv2_1486_54_5
Type: CAZyme
Location: 4482 - 5864 (+)
Gene ID: HRGMv2_1486_54_6
Type: STP
Location: 6121 - 7953 (+)
Gene ID: HRGMv2_1486_54_7
Type: TC
Location: 7947 - 9758 (+)
Gene ID: HRGMv2_1486_54_8
Type:
Location: 9761 - 10813 (+)
Gene ID: HRGMv2_1486_54_9
Type: TC
Location: 10817 - 12193 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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