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PROTEIN: HRGMv2_1486_54_8

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Protein File & Metadata
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Source:
HRGMv2_1486_54_8.pdb
Genome ID:
HRGMv2_1486
Protein ID:
HRGMv2_1486_54_8

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDFEMSR   RGFASALAAG   ALSLALVGCG   GGAAGAGSAA   GSAAGGAAGA   AEPVEVHVAS 60
LKGPTSIGLV   QFMDQAADGA   TDNEFDFAIS   AAADEIVPKV   IQGDVDIALV   PANVASVLYN 120
KTEGAVQVID   INTLGVLNVV   TGDASVASFG   DLAGHTVYMT   GKGTTPEYVM   NYLLERAGLT 180
GQVTLEFKSE   PTEVLSALLA   DPSAVGVLPE   PFKTAAIAKS   EGKLSAPVSL   TDVWDELAGD 240
TGSRLLTGVT   VVRRAFAEEH   PEAVAEFLSC   HAASVKAVNA   APADWAQAVV   DAGIVDNAKI 300
AEKAIPGCML   VCQTGKDMKA   ALSGYLQVLA   DADASAVGGK   LPADDFYYME 350
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 52 349 28 325 0.7459 0.8586
AF-A0A0H3GZA9-F1-model_v4 51 350 25 310 0.709 0.8423
AF-Q9I0P2-F1-model_v4 49 350 19 306 0.7088 0.834
AF-A0A0H3GP99-F1-model_v4 46 350 19 318 0.7085 0.8142
AF-A0A0D2GYL1-F1-model_v4 53 350 1 295 0.7024 0.8026
AF-A0A0H3GR32-F1-model_v4 50 350 46 344 0.6878 0.8128
AF-U7PRE8-F1-model_v4 50 350 14 324 0.6862 0.7903
AF-U7Q5Y8-F1-model_v4 49 350 2 313 0.6852 0.7882
AF-U7PXF6-F1-model_v4 53 350 1 294 0.6819 0.8046
AF-Q9I0N8-F1-model_v4 52 350 25 310 0.6801 0.8027
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A4P6RLL9-F1-model_v4 GH23 23 300 9 426 0.4349 0.6076
AF-A0A1Y4PH24-F1-model_v4 GH23 23 300 21 442 0.4337 0.6129
AF-A0A1C7H7G1-F1-model_v4 GH23 51 300 37 442 0.4313 0.6678
AF-E6SPV9-F1-model_v4 GH23 23 300 24 442 0.4307 0.6091
AF-L0RFS4-F1-model_v4 GH23 33 303 4 451 0.4297 0.6254
AF-A0A0P0ETY4-F1-model_v4 GH23 22 300 33 449 0.4292 0.6091
AF-F7LTV0-F1-model_v4 GH23 22 300 26 442 0.4287 0.6049
AF-D6D3U4-F1-model_v4 GH23 22 300 30 445 0.4286 0.6064
AF-A0A0K6BW89-F1-model_v4 GH23 20 300 26 442 0.4271 0.5983
AF-E1WT20-F1-model_v4 GH23 22 300 26 443 0.4269 0.6036
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
C8W6R6 CBM50 46 314 50 335 0.5246 0.6735
A0A975KCS4 GH23 49 300 43 339 0.4268 0.6631
E1YCM4 GH23 24 303 11 447 0.4244 0.5999
C6BRT1 GH23 41 303 34 474 0.4201 0.635
A0A2D2N719 GH23 49 300 82 502 0.4162 0.6677
A8ZWR8 GH23 23 303 14 450 0.411 0.5714
A0A1Y3Y3U2 GH23 22 298 26 282 0.4089 0.6166
A0A6I6K4Y9 GH23 2 298 2 299 0.4077 0.5524
F3Z2E8 GH23 54 303 43 459 0.4064 0.6383
A0A0S2HZI4 GH23 19 298 34 305 0.403 0.5899
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 53 350 1 279 0.7886 0.8936
2x26-assembly2.cif.gz_B 52 349 1 286 0.7342 0.835
2x26-assembly1.cif.gz_A 52 350 1 287 0.7155 0.8333
3un6-assembly1.cif.gz_A 53 350 1 283 0.6832 0.7869
3uif-assembly1.cif.gz_A 52 350 3 307 0.6768 0.786
3ksx-assembly1.cif.gz_A 51 350 1 289 0.6657 0.7532
7ahr-assembly1.cif.gz_A 53 350 5 280 0.6615 0.7716
6st1-assembly2.cif.gz_B 55 350 1 295 0.6539 0.7368
7an6-assembly1.cif.gz_B 53 350 5 282 0.6537 0.7582
7an9-assembly1.cif.gz_B 54 350 1 277 0.6529 0.7523
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 51 350 28 325 0.691 0.8068
AF-A9WGD2-F1-model_v4 51 350 42 344 0.6759 0.8026
AF-Q9KXN1-F1-model_v4 52 349 1 282 0.6723 0.7683
AF-P75853-F1-model_v4 44 350 16 311 0.664 0.7679
AF-Q5SI12-F1-model_v4 54 348 1 272 0.6451 0.7487
AF-Q8FUN4-F1-model_v4 49 350 19 317 0.6442 0.738
AF-Q576E1-F1-model_v4 49 350 19 317 0.6381 0.7325
AF-Q5ZV75-F1-model_v4 52 350 5 297 0.6372 0.7429
AF-Q47537-F1-model_v4 52 350 20 317 0.636 0.7339
AF-Q2YJB6-F1-model_v4 49 350 19 317 0.6357 0.73
Download Full SwissProt Results