Genome Details
Selected Rep_genome_ID: HRGMv2_1486
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1486 | 2,312,124 | 98.38% | 1.612% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1486_CGC5 | CGCFAM_00011 | Yes | 12 | 7 | |
| HRGMv2_1486_CGC16 | CGCFAM_00014 | Yes | 5 | 1 | host glycan |
| HRGMv2_1486_CGC17 | CGCFAM_00182 | Yes | 5 | 1 | |
| HRGMv2_1486_CGC19 | CGCFAM_00772 | Yes | 5 | 1 |
Top CAZyme Families