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Cluster: HRGMv2_1471_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1471_6 HRGMv2_1471_6_49 59321 60070 + 9.B.18.1.2
CAZyme HRGMv2_1471_6 HRGMv2_1471_6_50 60057 60863 + GT26
pfam HRGMv2_1471_6 HRGMv2_1471_6_51 60856 61965 + Epimerase_2
CAZyme HRGMv2_1471_6 HRGMv2_1471_6_52 61962 63071 + GT4
pfam HRGMv2_1471_6 HRGMv2_1471_6_53 63094 63939 + LicD
NULL(UNKNOWN) HRGMv2_1471_6 HRGMv2_1471_6_54 63932 64489 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1471_6 HRGMv2_1471_6_55 64505 65542 + GT2
pfam HRGMv2_1471_6 HRGMv2_1471_6_56 65558 66253 + Hexapep | Hexapep_2
NULL(UNKNOWN) HRGMv2_1471_6 HRGMv2_1471_6_57 66693 67403 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1471_6 HRGMv2_1471_6_58 67406 68407 + GT2
Gene ID: HRGMv2_1471_6_49
Type: TC
Location: 59321 - 60070 (+)
Gene ID: HRGMv2_1471_6_50
Type: CAZyme
Location: 60057 - 60863 (+)
Gene ID: HRGMv2_1471_6_51
Type: pfam
Location: 60856 - 61965 (+)
Gene ID: HRGMv2_1471_6_52
Type: CAZyme
Location: 61962 - 63071 (+)
Gene ID: HRGMv2_1471_6_53
Type: pfam
Location: 63094 - 63939 (+)
Gene ID: HRGMv2_1471_6_54
Type:
Location: 63932 - 64489 (+)
Gene ID: HRGMv2_1471_6_55
Type: CAZyme
Location: 64505 - 65542 (+)
Gene ID: HRGMv2_1471_6_56
Type: pfam
Location: 65558 - 66253 (+)
Gene ID: HRGMv2_1471_6_57
Type:
Location: 66693 - 67403 (+)
Gene ID: HRGMv2_1471_6_58
Type: CAZyme
Location: 67406 - 68407 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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