PROTEIN: HRGMv2_1471_6_57
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Protein File & Metadata
Source:
HRGMv2_1471_6_57.pdb
Genome ID:
Protein ID:
HRGMv2_1471_6_57
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Protein Sequence
MALINGLKYL YNSIFLNNDL LISRLRKLGV AIGDDVTFYC PKEMTVDIQN PHLITIGDHV 60 KITGPSTILT HDYSWGVIKG KTGEVLGNQK HVTIGNNIFI GWGATILCGT TIEDNVIVGA 120 HSVVSGRLEH DSVYAGVPAK KVCSLECYRE KRASAQLEEA KDYVVRFRRR FGRDPRADEM 180 REYFFLWATP DRLNDSYVFQ MSLMGTYDKS EAILATPRQF NSFEQFLAYC DNAEVE 236
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P07464-F1-model_v4 | 11 | 197 | 41 | 203 | 0.563 |
0.759 |
| AF-P26841-F1-model_v4 | 9 | 215 | 6 | 195 | 0.5435 |
0.6514 |
| AF-U7PR58-F1-model_v4 | 9 | 146 | 59 | 225 | 0.4904 |
0.8095 |
| AF-A0A0D2GJL7-F1-model_v4 | 12 | 149 | 42 | 207 | 0.4796 |
0.8096 |
| AF-K0EN20-F1-model_v4 | 16 | 206 | 702 | 992 | 0.2946 |
0.6139 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Z4N893-F1-model_v4 | GT2 | 10 | 231 | 326 | 492 | 0.3898 |
0.7368 |
| AF-Q0RP22-F1-model_v4 | GT4 | 15 | 171 | 474 | 637 | 0.3834 |
0.8249 |
| D8DUW3 | GT2 | 12 | 205 | 269 | 419 | 0.3812 |
0.749 |
| A0A9W4F949 | GT2 | 13 | 222 | 327 | 486 | 0.3735 |
0.7353 |
| AF-A0A517YPZ3-F1-model_v4 | GT2 | 12 | 211 | 341 | 490 | 0.3665 |
0.7629 |
| A0A7M2X016 | GT2 | 12 | 217 | 373 | 526 | 0.3608 |
0.7488 |
| AF-A0A7D3XW08-F1-model_v4 | PL12 | 12 | 232 | 1 | 646 | 0.3501 |
0.552 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q0RP22 | GT4 | 15 | 171 | 474 | 637 | 0.3834 |
0.8249 |
| D8DUW3 | GT2 | 12 | 205 | 269 | 419 | 0.3812 |
0.749 |
| A0A9W4F949 | GT2 | 13 | 222 | 327 | 486 | 0.3735 |
0.7353 |
| A0A517YPZ3 | GT2 | 12 | 211 | 341 | 490 | 0.3665 |
0.7629 |
| A0A7M2X016 | GT2 | 12 | 217 | 373 | 526 | 0.3608 |
0.7488 |
| A0A7D3XW08 | PL12 | 12 | 232 | 1 | 646 | 0.3501 |
0.552 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ect-assembly1.cif.gz_A | 13 | 147 | 31 | 176 | 0.5506 |
0.8226 |
| 1xat-assembly1.cif.gz_A | 8 | 215 | 3 | 193 | 0.5481 |
0.6477 |
| 6pua-assembly1.cif.gz_A | 8 | 215 | 5 | 194 | 0.5472 |
0.6518 |
| 6mfk-assembly1.cif.gz_A | 9 | 214 | 8 | 199 | 0.5452 |
0.6445 |
| 3srt-assembly2.cif.gz_B | 12 | 149 | 40 | 187 | 0.5379 |
0.8128 |
| 4egg-assembly1.cif.gz_A | 12 | 209 | 39 | 188 | 0.5357 |
0.7495 |
| 4hzd-assembly1.cif.gz_A | 1 | 204 | 23 | 250 | 0.4647 |
0.56 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39856-F1-model_v4 | 14 | 236 | 9 | 172 | 0.6587 |
0.8128 |
| AF-O34993-F1-model_v4 | 14 | 218 | 39 | 172 | 0.6069 |
0.9051 |
| AF-Q6GIM9-F1-model_v4 | 14 | 149 | 39 | 161 | 0.5954 |
0.9305 |
| AF-P07464-F1-model_v4 | 11 | 197 | 41 | 203 | 0.563 |
0.759 |
| AF-P0ACD3-F1-model_v4 | 12 | 213 | 35 | 182 | 0.5494 |
0.7681 |
| AF-P50868-F1-model_v4 | 9 | 215 | 6 | 195 | 0.5459 |
0.651 |
| AF-P50869-F1-model_v4 | 9 | 216 | 6 | 197 | 0.5456 |
0.645 |
| AF-P26841-F1-model_v4 | 9 | 215 | 6 | 195 | 0.5435 |
0.6514 |
| AF-Q6G6B9-F1-model_v4 | 12 | 159 | 39 | 197 | 0.5375 |
0.7814 |
| AF-Q6GDP3-F1-model_v4 | 12 | 226 | 39 | 196 | 0.5375 |
0.7378 |