PROTEIN: HRGMv2_1471_6_54
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Protein File & Metadata
Source:
HRGMv2_1471_6_54.pdb
Genome ID:
Protein ID:
HRGMv2_1471_6_54
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Protein Sequence
MNRIAKALKW GASALRVLRV RIVAGNRLKI ASGKPLYLGK GTRLILGEGA SLSIGAGVYL 60 SPECIVQVNK GATLVLEDGV YMNEGCRVTV VESARIGADT LFGPNVQIYD HDHEFDRRGG 120 VSSKLLHTPV SIGHRCWLCA NTVVTRGCSI ACCSLVSANS VVTRDLNEAG ALYAGVPARL 180 IKRYD 185
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58464-F1-model_v4 | 11 | 185 | 25 | 214 | 0.7921 |
0.9118 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4K001-F1-model_v4 | GT1 | 1 | 184 | 21 | 228 | 0.7961 |
0.9015 |
| AF-A0A345S1R4-F1-model_v4 | GT8 | 25 | 185 | 1 | 159 | 0.6527 |
0.9381 |
| A0A2A7A176 | GT32 | 1 | 177 | 243 | 419 | 0.6198 |
0.9129 |
| AF-D4K9D8-F1-model_v4 | GT32 | 1 | 176 | 243 | 418 | 0.6178 |
0.915 |
| A0A4H1EF62 | GT8 | 25 | 176 | 136 | 283 | 0.6078 |
0.9338 |
| AF-A0A7G1IUX2-F1-model_v4 | GT8 | 25 | 176 | 136 | 283 | 0.6074 |
0.9332 |
| AF-A0A6M9FFP9-F1-model_v4 | GT8 | 22 | 177 | 1 | 148 | 0.6071 |
0.9316 |
| AF-D3HAK2-F1-model_v4 | GT8 | 25 | 176 | 136 | 283 | 0.605 |
0.9296 |
| AF-A0A7H8V8G0-F1-model_v4 | GT8 | 30 | 177 | 1 | 145 | 0.6026 |
0.9401 |
| AF-A0A1W6KII1-F1-model_v4 | GT2 | 2 | 185 | 283 | 478 | 0.5994 |
0.8871 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4K001 | GT1 | 1 | 184 | 21 | 228 | 0.7961 |
0.9015 |
| A0A345S1R4 | GT8 | 25 | 185 | 1 | 159 | 0.6527 |
0.9381 |
| A0A2A7A176 | GT32 | 1 | 177 | 243 | 419 | 0.6198 |
0.9129 |
| A0A4H1EF62 | GT8 | 25 | 176 | 136 | 283 | 0.6078 |
0.9338 |
| A0A5B8KER9 | GT4 | 1 | 185 | 392 | 601 | 0.5844 |
0.9057 |
| C1D4M7 | GT2 | 4 | 185 | 372 | 546 | 0.5679 |
0.9059 |
| A0A402CU73 | GT2 | 16 | 185 | 348 | 520 | 0.5384 |
0.8695 |
| A0A5P9CFB7 | GT4 | 11 | 185 | 380 | 554 | 0.5277 |
0.8448 |
| A0A1S8SH84 | GT2 | 3 | 185 | 486 | 674 | 0.4952 |
0.8542 |
| D0I3Z1 | CE4 , GT4 | 13 | 185 | 595 | 771 | 0.4938 |
0.8593 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3vbk-assembly1.cif.gz_E | 5 | 185 | 1 | 172 | 0.7929 |
0.8743 |
| 3vbn-assembly1.cif.gz_E | 8 | 185 | 1 | 172 | 0.7925 |
0.8739 |
| 3vbp-assembly1.cif.gz_E | 9 | 185 | 1 | 171 | 0.7914 |
0.8752 |
| 3vbj-assembly1.cif.gz_E | 5 | 185 | 1 | 172 | 0.791 |
0.8725 |
| 3vbl-assembly1.cif.gz_A | 5 | 185 | 1 | 173 | 0.7884 |
0.8675 |
| 3jqy-assembly1.cif.gz_A | 14 | 185 | 10 | 201 | 0.698 |
0.849 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9XCW3-F1-model_v4 | 9 | 185 | 1 | 173 | 0.8047 |
0.8933 |
| AF-Q58464-F1-model_v4 | 11 | 185 | 25 | 214 | 0.7921 |
0.9118 |
| AF-P08632-F1-model_v4 | 8 | 185 | 41 | 186 | 0.6788 |
0.8828 |
| AF-A1ADJ6-F1-model_v4 | 11 | 185 | 88 | 282 | 0.631 |
0.8413 |