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Cluster: HRGMv2_1438_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1438_15 HRGMv2_1438_15_20 29811 30560 + 9.B.18.1.2
pfam HRGMv2_1438_15 HRGMv2_1438_15_21 30561 31028 + Alg14
pfam HRGMv2_1438_15 HRGMv2_1438_15_22 31040 31525 + Glyco_tran_28_C
CAZyme HRGMv2_1438_15 HRGMv2_1438_15_23 31530 32273 + GT32
CAZyme HRGMv2_1438_15 HRGMv2_1438_15_24 32273 33169 + GT2
NULL(UNKNOWN) HRGMv2_1438_15 HRGMv2_1438_15_25 33166 34308 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1438_15 HRGMv2_1438_15_26 34652 34816 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1438_15 HRGMv2_1438_15_27 34818 35768 + GT2
NULL(UNKNOWN) HRGMv2_1438_15 HRGMv2_1438_15_28 35776 36678 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1438_15 HRGMv2_1438_15_29 37178 38608 + 2.A.66.2.23
Gene ID: HRGMv2_1438_15_20
Type: TC
Location: 29811 - 30560 (+)
Gene ID: HRGMv2_1438_15_21
Type: pfam
Location: 30561 - 31028 (+)
Gene ID: HRGMv2_1438_15_22
Type: pfam
Location: 31040 - 31525 (+)
Gene ID: HRGMv2_1438_15_23
Type: CAZyme
Location: 31530 - 32273 (+)
Gene ID: HRGMv2_1438_15_24
Type: CAZyme
Location: 32273 - 33169 (+)
Gene ID: HRGMv2_1438_15_25
Type:
Location: 33166 - 34308 (+)
Gene ID: HRGMv2_1438_15_26
Type:
Location: 34652 - 34816 (+)
Gene ID: HRGMv2_1438_15_27
Type: CAZyme
Location: 34818 - 35768 (+)
Gene ID: HRGMv2_1438_15_28
Type:
Location: 35776 - 36678 (+)
Gene ID: HRGMv2_1438_15_29
Type: TC
Location: 37178 - 38608 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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