Genome Details
Selected Rep_genome_ID: HRGMv2_1438
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019414325
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1438 | 2,139,507 | 100% | 1.881% | Japan | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1438_CGC6 | CGCFAM_00002 | Yes | 7 | 3 | |
| HRGMv2_1438_CGC12 | CGCFAM_00042 | Yes | 5 | 1 | beta-glucan |
| HRGMv2_1438_CGC8 | CGCFAM_00416 | Yes | 10 | 3 |
Top CAZyme Families