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PROTEIN: HRGMv2_1438_15_28

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_1438_15_28.pdb
Genome ID:
HRGMv2_1438
Protein ID:
HRGMv2_1438_15_28

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Detailed structural information will appear here after analysis...

Protein Sequence 
MLLRKAARCV   RHPSLVRFEI   ERRSRLREVS   KFDFRPYMSA   PISNNTYISL   TSYGARLNAV 60
HMAIRSLLMQ   SVRPSKVLLY   LDESIQRDTL   SDDLLDLEQY   GLEIRMGYED   LGPHKKYLFA 120
FQEFPDSLII   TADDDLIYPA   DMVESLLTAH   EAVPYCVVAR   RCHLIGFDVA   GDLLPYEKWG 180
WEHKDAFSAP   SRRLLATGGA   GALYPTAAFD   LASLDIEAIR   GVAWPADDLY   LKFFELANGI 240
EVAYAPNRQN   HPYQLEGPRS   DALCNANVAG   GRNDAIMAEL   MCRYGLSPSY   FEEGYRVTSS 300
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1D6GVM9-F1-model_v4 10 293 53 324 0.6587 0.7832
AF-O24928-F1-model_v4 43 288 1 231 0.6289 0.7688
AF-Q48215-F1-model_v4 43 292 1 235 0.6255 0.7647
AF-I1MD27-F1-model_v4 42 293 42 299 0.6245 0.7831
AF-Q9C975-F1-model_v4 42 293 44 302 0.6194 0.7798
AF-B7F9C5-F1-model_v4 43 293 85 329 0.6162 0.8097
AF-A0A0R0GDK3-F1-model_v4 42 293 42 291 0.6117 0.7626
AF-P9WMX3-F1-model_v4 42 290 1 260 0.605 0.744
AF-P77414-F1-model_v4 42 292 3 239 0.5931 0.7354
AF-H9L431-F1-model_v4 42 292 4 240 0.5926 0.7361
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F4LMH6-F1-model_v4 GT0 10 293 1 278 0.8776 0.9255
AF-F4AXW5-F1-model_v4 GT0 14 293 2 275 0.8688 0.9247
AF-E6W6P2-F1-model_v4 GT0 14 292 2 273 0.8672 0.9263
AF-F0RFH3-F1-model_v4 GT0 11 296 1 278 0.8638 0.9127
AF-A4CMP9-F1-model_v4 GT0 12 291 2 273 0.8591 0.9174
AF-Q21E82-F1-model_v4 GT0 19 296 1 275 0.8585 0.9171
AF-Q4K2G8-F1-model_v4 GT0 11 293 10 289 0.8581 0.9161
AF-Q93CR4-F1-model_v4 GT0 10 295 2 287 0.8551 0.894
AF-A0A160PPJ8-F1-model_v4 GT0 8 295 2 285 0.8544 0.8998
AF-A0A172QR42-F1-model_v4 GT0 8 295 2 285 0.854 0.8994
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2I7N625 GT2 42 298 5 243 0.6788 0.7814
A0A422LTK2 GT2 42 291 3 238 0.652 0.7704
E2DNQ7 GT2 42 290 2 233 0.6502 0.7743
UXR29512.1 GT2 39 291 1 236 0.6479 0.7814
A0A109RI30 GT2 42 291 4 241 0.6451 0.7593
A0A7S7L4D7 GT2 42 295 6 245 0.645 0.7601
Q0A644 GT2 42 291 3 238 0.6424 0.7609
A0A286IMF8 GT2 42 291 4 240 0.6412 0.7649
K0C3Q7 GT2 44 291 1 237 0.6401 0.7718
QKJ38578.1 GT2 42 291 3 243 0.6401 0.7682
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5z8b-assembly1.cif.gz_A 45 259 1 199 0.6722 0.8455
6yv9-assembly1.cif.gz_A 41 295 39 272 0.5669 0.774
2ffv-assembly2.cif.gz_B 22 295 21 346 0.53 0.7176
6e4r-assembly1.cif.gz_A 16 295 5 367 0.5281 0.7133
6e4q-assembly4.cif.gz_D 16 295 5 361 0.5224 0.7043
5nqa-assembly2.cif.gz_B 19 295 17 367 0.5209 0.7159
6e4q-assembly3.cif.gz_C 19 295 5 362 0.5205 0.7096
6e4q-assembly1.cif.gz_A 16 295 5 364 0.5201 0.7022
5nqa-assembly1.cif.gz_A 19 295 18 367 0.5177 0.7114
6nqt-assembly1.cif.gz_A 22 295 34 359 0.5115 0.7004
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q03084-F1-model_v4 41 291 3 244 0.6378 0.7692
AF-Q46635-F1-model_v4 44 292 1 237 0.6333 0.7669
AF-Q48215-F1-model_v4 43 292 1 235 0.6255 0.7647
AF-Q9C975-F1-model_v4 42 293 44 302 0.6194 0.7798
AF-P71054-F1-model_v4 40 292 1 239 0.615 0.7556
AF-P9WMX3-F1-model_v4 42 290 1 260 0.605 0.744
AF-P9WMX2-F1-model_v4 42 290 1 260 0.6046 0.7436
AF-A0R5Z2-F1-model_v4 42 290 3 263 0.6027 0.7397
AF-P77414-F1-model_v4 42 292 3 239 0.5931 0.7354
AF-Q07755-F1-model_v4 42 295 46 302 0.5542 0.747
Download Full SwissProt Results