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Cluster: HRGMv2_0552_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0552_3 HRGMv2_0552_3_76 95895 96938 + 8.A.1.1.2
NULL(UNKNOWN) HRGMv2_0552_3 HRGMv2_0552_3_77 96968 98536 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0552_3 HRGMv2_0552_3_78 98632 99570 + 2.A.4.7.9
CAZyme HRGMv2_0552_3 HRGMv2_0552_3_79 99694 101985 - GH3
CAZyme HRGMv2_0552_3 HRGMv2_0552_3_80 101982 103493 - GH28
CAZyme HRGMv2_0552_3 HRGMv2_0552_3_81 103523 105007 - GH28
pfam HRGMv2_0552_3 HRGMv2_0552_3_82 105357 105560 - TatA_B_E
CAZyme HRGMv2_0552_3 HRGMv2_0552_3_83 105583 106881 - GH29
CAZyme HRGMv2_0552_3 HRGMv2_0552_3_84 107014 109344 - GH3
CAZyme HRGMv2_0552_3 HRGMv2_0552_3_85 109369 111189 - GH29
Gene ID: HRGMv2_0552_3_76
Type: TC
Location: 95895 - 96938 (+)
Gene ID: HRGMv2_0552_3_77
Type:
Location: 96968 - 98536 (+)
Gene ID: HRGMv2_0552_3_78
Type: TC
Location: 98632 - 99570 (+)
Gene ID: HRGMv2_0552_3_79
Type: CAZyme
Location: 99694 - 101985 (-)
Gene ID: HRGMv2_0552_3_80
Type: CAZyme
Location: 101982 - 103493 (-)
Gene ID: HRGMv2_0552_3_81
Type: CAZyme
Location: 103523 - 105007 (-)
Gene ID: HRGMv2_0552_3_82
Type: pfam
Location: 105357 - 105560 (-)
Gene ID: HRGMv2_0552_3_83
Type: CAZyme
Location: 105583 - 106881 (-)
Gene ID: HRGMv2_0552_3_84
Type: CAZyme
Location: 107014 - 109344 (-)
Gene ID: HRGMv2_0552_3_85
Type: CAZyme
Location: 109369 - 111189 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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