PROTEIN: HRGMv2_0552_3_77
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Protein File & Metadata
Source:
HRGMv2_0552_3_77.pdb
Genome ID:
Protein ID:
HRGMv2_0552_3_77
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Protein Sequence
MPGPPILQGP FRVPSFNGYI PRRLQPWLYL VIAFLFQFSA GIYGGAMPQV MGSQSLMRED 60 VLMIVMCNVV GVNMPFPFLF RLKFRFTNRQ LLITAALVVG VCNVAIVHTQ SVVAMCIIAY 120 VAGFFKLCGT FECMSNIQLW MTPKRDFTIF FPLLYCVVLG NMSLCPWITE HLVYIYQDWR 180 CMNYLMAGAM MTVALFLIIT THNFRFMKPL PFVSLDWLGC ILWSLLMVEV IFFFNYGEFY 240 NWMDSRVMQG CLFMIAMTLW LCIGRMLHIR HPYIAPAAWR YKRLVPLLVL FAFVEWMGST 300 PKVLQTAFTS GVMHWGGLTT NVFNLIEWVA AIAGCLFCLL WIKVLHQKYT RLLTVGVAAM 360 VTYPVMLYLL IDPTLNIEAL YLPVFLRQFG NAIFFTTLTI YLEELMPFEH FFMGLTMAGL 420 VRNGTVGTMC SGLYSLALRH QIADNMVRGL PYDMTGLMMI SIRQLYGVTC VVGVAVLIIF 480 LLWDIQPVPS TLKKMPAWNY LGRRAKRFLR RQQADTRTAV KK 522
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 2 | 496 | 1 | 505 | 0.7963 |
0.8458 |
| AF-Q9I482-F1-model_v4 | 1 | 491 | 1 | 471 | 0.7949 |
0.8597 |
| AF-Q5F680-F1-model_v4 | 3 | 497 | 1 | 507 | 0.7926 |
0.8381 |
| AF-A0A0H3GPJ5-F1-model_v4 | 3 | 491 | 1 | 470 | 0.7924 |
0.8551 |
| AF-A0A0H3GUZ8-F1-model_v4 | 2 | 497 | 1 | 497 | 0.7912 |
0.8302 |
| AF-A0A133CZJ2-F1-model_v4 | 6 | 503 | 1 | 490 | 0.7843 |
0.8277 |
| AF-P52600-F1-model_v4 | 1 | 494 | 2 | 511 | 0.784 |
0.8383 |
| AF-Q9I260-F1-model_v4 | 3 | 493 | 1 | 465 | 0.7825 |
0.8502 |
| AF-Q2FW85-F1-model_v4 | 4 | 495 | 2 | 476 | 0.7781 |
0.8383 |
| AF-A0A0H3GSP9-F1-model_v4 | 1 | 487 | 10 | 535 | 0.7766 |
0.8651 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 5 | 492 | 7 | 534 | 0.7122 |
0.8005 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 7 | 510 | 16 | 481 | 0.6606 |
0.7337 |
| AF-A2S189-F1-model_v4 | GH3 | 3 | 492 | 2 | 413 | 0.6543 |
0.7538 |
| ARF89445.1 | GT1 | 1 | 491 | 263 | 953 | 0.6267 |
0.8627 |
| A0A9W8R2E6 | GH88 | 1 | 501 | 29 | 503 | 0.617 |
0.6868 |
| WBC00074.1 | CBM42 , GH2 | 1 | 494 | 1 | 493 | 0.6128 |
0.6637 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 10 | 504 | 30 | 679 | 0.5957 |
0.8154 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 6 | 522 | 2 | 567 | 0.5639 |
0.6894 |
| A0A3C1RID2 | GH17 | 8 | 522 | 7 | 787 | 0.5608 |
0.6899 |
| AF-A0A7H9AV10-F1-model_v4 | GH17 | 23 | 522 | 1 | 536 | 0.5586 |
0.7028 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 5 | 492 | 7 | 534 | 0.7122 |
0.8005 |
| A2S189 | GH3 | 3 | 492 | 2 | 413 | 0.6543 |
0.7538 |
| ARF89445.1 | GT1 | 1 | 491 | 263 | 953 | 0.6267 |
0.8627 |
| A0A9W8R2E6 | GH88 | 1 | 501 | 29 | 503 | 0.617 |
0.6868 |
| WBC00074.1 | CBM42 , GH2 | 1 | 494 | 1 | 493 | 0.6128 |
0.6637 |
| A0A387HHJ8 | GT1 | 10 | 504 | 30 | 679 | 0.5957 |
0.8154 |
| A0A3C1RID2 | GH17 | 8 | 522 | 7 | 787 | 0.5608 |
0.6899 |
| AIH01647.1 | GH17 | 6 | 515 | 3 | 512 | 0.553 |
0.6927 |
| A0A7H8RF34 | CBM24 | 1 | 491 | 290 | 753 | 0.5462 |
0.7361 |
| A0A918L8E6 | GT2 | 11 | 494 | 1 | 440 | 0.5389 |
0.719 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 11 | 489 | 1 | 483 | 0.7503 |
0.804 |
| 8pnl-assembly2.cif.gz_C | 11 | 490 | 1 | 486 | 0.743 |
0.7975 |
| 7y58-assembly1.cif.gz_A | 4 | 495 | 4 | 510 | 0.7418 |
0.7965 |
| 7d5p-assembly1.cif.gz_A | 11 | 487 | 1 | 408 | 0.7241 |
0.8283 |
| 7d5p-assembly2.cif.gz_B | 25 | 487 | 1 | 413 | 0.7241 |
0.8243 |
| 7d5q-assembly2.cif.gz_B | 25 | 487 | 1 | 411 | 0.7202 |
0.822 |
| 7d5q-assembly1.cif.gz_A | 25 | 487 | 1 | 403 | 0.7166 |
0.8243 |
| 6kkl-assembly1.cif.gz_A | 20 | 490 | 1 | 372 | 0.709 |
0.8409 |
| 8ex5-assembly1.cif.gz_A | 11 | 504 | 1 | 414 | 0.7055 |
0.8025 |
| 6oom-assembly2.cif.gz_A-2 | 16 | 486 | 1 | 392 | 0.7019 |
0.8169 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P32369-F1-model_v4 | 6 | 493 | 3 | 474 | 0.7985 |
0.8611 |
| AF-Q9RQ29-F1-model_v4 | 3 | 496 | 1 | 506 | 0.7958 |
0.8431 |
| AF-P94422-F1-model_v4 | 2 | 497 | 3 | 471 | 0.7937 |
0.8562 |
| AF-P0DPR7-F1-model_v4 | 7 | 492 | 4 | 512 | 0.7907 |
0.8544 |
| AF-P0AEJ1-F1-model_v4 | 3 | 495 | 1 | 507 | 0.7863 |
0.8415 |
| AF-P0AEJ0-F1-model_v4 | 3 | 494 | 1 | 507 | 0.7855 |
0.8423 |
| AF-P52600-F1-model_v4 | 1 | 494 | 2 | 511 | 0.784 |
0.8383 |
| AF-Q8Y9K8-F1-model_v4 | 2 | 491 | 4 | 471 | 0.783 |
0.8465 |
| AF-Q92EE1-F1-model_v4 | 2 | 491 | 4 | 471 | 0.7811 |
0.8447 |
| AF-O35018-F1-model_v4 | 3 | 494 | 6 | 479 | 0.7798 |
0.84 |