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Cluster: HRGMv2_0525_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0525_11 HRGMv2_0525_11_30 29800 30570 - 3.A.1.7.2
TC HRGMv2_0525_11 HRGMv2_0525_11_31 30558 31427 - 3.A.1.7.1
TC HRGMv2_0525_11 HRGMv2_0525_11_32 31450 32307 - 3.A.1.7.1
TC HRGMv2_0525_11 HRGMv2_0525_11_33 32422 33486 - 3.A.1.7.1
NULL(UNKNOWN) HRGMv2_0525_11 HRGMv2_0525_11_34 33525 34508 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0525_11 HRGMv2_0525_11_35 34792 36909 + 2.A.36.7.6
pfam HRGMv2_0525_11 HRGMv2_0525_11_36 36964 37377 + DUF2007
pfam HRGMv2_0525_11 HRGMv2_0525_11_37 37384 37686 - Acetyltransf_1 | Acetyltransf_CG
CAZyme HRGMv2_0525_11 HRGMv2_0525_11_38 37861 39849 + GH20
pfam HRGMv2_0525_11 HRGMv2_0525_11_39 39964 40677 - DNA_alkylation
TC HRGMv2_0525_11 HRGMv2_0525_11_40 40766 42409 - 1.B.9.4.2
NULL(UNKNOWN) HRGMv2_0525_11 HRGMv2_0525_11_41 42436 43659 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0525_11 HRGMv2_0525_11_42 43791 44636 + PCMT | Cons_hypoth95 | MTS | PrmA | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_0525_11 HRGMv2_0525_11_43 44709 45641 - GH25
pfam HRGMv2_0525_11 HRGMv2_0525_11_44 45838 47481 - PFK
TC HRGMv2_0525_11 HRGMv2_0525_11_45 47666 48628 - 2.A.115.1.2
Gene ID: HRGMv2_0525_11_30
Type: TC
Location: 29800 - 30570 (-)
Gene ID: HRGMv2_0525_11_31
Type: TC
Location: 30558 - 31427 (-)
Gene ID: HRGMv2_0525_11_32
Type: TC
Location: 31450 - 32307 (-)
Gene ID: HRGMv2_0525_11_33
Type: TC
Location: 32422 - 33486 (-)
Gene ID: HRGMv2_0525_11_34
Type:
Location: 33525 - 34508 (-)
Gene ID: HRGMv2_0525_11_35
Type: TC
Location: 34792 - 36909 (+)
Gene ID: HRGMv2_0525_11_36
Type: pfam
Location: 36964 - 37377 (+)
Gene ID: HRGMv2_0525_11_37
Type: pfam
Location: 37384 - 37686 (-)
Gene ID: HRGMv2_0525_11_38
Type: CAZyme
Location: 37861 - 39849 (+)
Gene ID: HRGMv2_0525_11_39
Type: pfam
Location: 39964 - 40677 (-)
Gene ID: HRGMv2_0525_11_40
Type: TC
Location: 40766 - 42409 (-)
Gene ID: HRGMv2_0525_11_41
Type:
Location: 42436 - 43659 (-)
Gene ID: HRGMv2_0525_11_42
Type: pfam
Location: 43791 - 44636 (+)
Gene ID: HRGMv2_0525_11_43
Type: CAZyme
Location: 44709 - 45641 (-)
Gene ID: HRGMv2_0525_11_44
Type: pfam
Location: 45838 - 47481 (-)
Gene ID: HRGMv2_0525_11_45
Type: TC
Location: 47666 - 48628 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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