PROTEIN: HRGMv2_0525_11_34
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Protein File & Metadata
Source:
HRGMv2_0525_11_34.pdb
Genome ID:
Protein ID:
HRGMv2_0525_11_34
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Protein Sequence
MKKLWIIAGL MGYMAFPALA QGKVEKEAKK GDAIITIFSD FHSGFGSTND ERGFNLERAY 60 VGYQYKLGHG LKVKGVVDFG QSKDVNDYQR IGYIKNAQLT WQHGAWTLNA GLISTTQFKV 120 QEDFWGKRYV MKSFQDEYKF GSSADLAISA AYRFNKYLSA DVILANGEGY KKVQVKDGLQ 180 YGAGLTLTPV DGLTVRAYGS YNEASEDGQK GTTNLAAFAG FKKSCFSVAA EYNYMTNASF 240 TDTHDRSGVS VYTTIQIAKN IGLFGRWDYL SSKDKWDEAN DGNAGIVGAD FKLGKYVKLS 300 PNFRVWSPRQ DARANQYYAY LNASFSL 327
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43839-F1-model_v4 | 21 | 327 | 5 | 359 | 0.7535 |
0.8542 |
| AF-A0A0H3GIV3-F1-model_v4 | 23 | 327 | 5 | 350 | 0.7409 |
0.8351 |
| AF-P02932-F1-model_v4 | 23 | 327 | 3 | 351 | 0.7395 |
0.8358 |
| AF-P37432-F1-model_v4 | 25 | 327 | 26 | 363 | 0.7389 |
0.8521 |
| AF-P30705-F1-model_v4 | 26 | 327 | 25 | 350 | 0.7375 |
0.8383 |
| AF-Q5F5V7-F1-model_v4 | 27 | 327 | 17 | 348 | 0.7357 |
0.8378 |
| AF-Q9I2D1-F1-model_v4 | 19 | 327 | 1 | 399 | 0.7306 |
0.8612 |
| AF-Q8ZPH7-F1-model_v4 | 26 | 327 | 27 | 372 | 0.7298 |
0.8535 |
| AF-Q9S4Z2-F1-model_v4 | 26 | 327 | 29 | 377 | 0.7289 |
0.8566 |
| AF-P37592-F1-model_v4 | 25 | 327 | 25 | 362 | 0.7271 |
0.8367 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wi5-assembly1.cif.gz_A | 30 | 327 | 1 | 312 | 0.7738 |
0.8456 |
| 3wi4-assembly1.cif.gz_A | 30 | 327 | 1 | 309 | 0.7729 |
0.8406 |
| 5o78-assembly1.cif.gz_C | 27 | 327 | 1 | 331 | 0.7623 |
0.8488 |
| 4aui-assembly1.cif.gz_C | 30 | 327 | 1 | 308 | 0.7623 |
0.8281 |
| 6ehe-assembly1.cif.gz_A | 27 | 327 | 1 | 302 | 0.7611 |
0.813 |
| 4d65-assembly2.cif.gz_F | 25 | 327 | 4 | 343 | 0.7598 |
0.8545 |
| 1pho-assembly1.cif.gz_A | 26 | 327 | 5 | 330 | 0.7594 |
0.8411 |
| 4kr8-assembly1.cif.gz_B | 25 | 327 | 4 | 340 | 0.759 |
0.8501 |
| 6ene-assembly1.cif.gz_C | 26 | 327 | 5 | 329 | 0.7588 |
0.8397 |
| 4kr4-assembly1.cif.gz_C | 26 | 327 | 4 | 334 | 0.7588 |
0.8461 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P30690-F1-model_v4 | 25 | 327 | 15 | 331 | 0.7604 |
0.841 |
| AF-P57042-F1-model_v4 | 25 | 327 | 15 | 329 | 0.76 |
0.838 |
| AF-P30689-F1-model_v4 | 25 | 327 | 15 | 331 | 0.7589 |
0.8394 |
| AF-P30688-F1-model_v4 | 25 | 327 | 15 | 331 | 0.7578 |
0.8384 |
| AF-P30687-F1-model_v4 | 25 | 327 | 15 | 331 | 0.7563 |
0.8365 |
| AF-E6MZM0-F1-model_v4 | 25 | 327 | 15 | 331 | 0.7551 |
0.8354 |
| AF-P05430-F1-model_v4 | 25 | 327 | 15 | 326 | 0.7548 |
0.8291 |
| AF-P43839-F1-model_v4 | 21 | 327 | 5 | 359 | 0.7535 |
0.8542 |
| AF-Q48221-F1-model_v4 | 22 | 327 | 5 | 353 | 0.7496 |
0.8454 |
| AF-J9RX10-F1-model_v4 | 22 | 327 | 2 | 357 | 0.7455 |
0.8441 |