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Cluster: HRGMv2_0430_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0430_39 HRGMv2_0430_39_9 10651 11697 - GT4
NULL(UNKNOWN) HRGMv2_0430_39 HRGMv2_0430_39_10 11732 12034 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0430_39 HRGMv2_0430_39_11 12157 12648 - GT2
CAZyme HRGMv2_0430_39 HRGMv2_0430_39_12 12658 13593 - GT2
pfam HRGMv2_0430_39 HRGMv2_0430_39_13 13606 14673 - Glyco_tran_WbsX
CAZyme HRGMv2_0430_39 HRGMv2_0430_39_14 14717 15859 - GT4
pfam HRGMv2_0430_39 HRGMv2_0430_39_15 15902 17464 - PDDEXK_9 | AAA-ATPase_like
NULL(UNKNOWN) HRGMv2_0430_39 HRGMv2_0430_39_16 17569 19077 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0430_39 HRGMv2_0430_39_17 19134 21275 - 8.A.3.3.3
Gene ID: HRGMv2_0430_39_9
Type: CAZyme
Location: 10651 - 11697 (-)
Gene ID: HRGMv2_0430_39_10
Type:
Location: 11732 - 12034 (-)
Gene ID: HRGMv2_0430_39_11
Type: CAZyme
Location: 12157 - 12648 (-)
Gene ID: HRGMv2_0430_39_12
Type: CAZyme
Location: 12658 - 13593 (-)
Gene ID: HRGMv2_0430_39_13
Type: pfam
Location: 13606 - 14673 (-)
Gene ID: HRGMv2_0430_39_14
Type: CAZyme
Location: 14717 - 15859 (-)
Gene ID: HRGMv2_0430_39_15
Type: pfam
Location: 15902 - 17464 (-)
Gene ID: HRGMv2_0430_39_16
Type:
Location: 17569 - 19077 (-)
Gene ID: HRGMv2_0430_39_17
Type: TC
Location: 19134 - 21275 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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