Genome Details
Selected Rep_genome_ID: HRGMv2_0430
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp934255485
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF380_64 | 2,423,068 | 97.27% | 0.56% | NA | Africa | H3AfricaPhase2 |
| CGMR021167 | 2,401,259 | 96.6% | 0.37% | China | Asia | CGMR |
| HRGMv2_0430 | 2,428,058 | 97.64% | 0% | Congo | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_K_19_2488.137 | 2,281,447 | 97.15% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0430_CGC9 | CGCFAM_00358 | Yes | 4 | 2 | |
| HRGMv2_0430_CGC7 | CGCFAM_00431 | Yes | 5 | 1 | |
| HRGMv2_0430_CGC14 | CGCFAM_00713 | Yes | 3 | 1 | |
| HRGMv2_0430_CGC5 | CGCFAM_03106 | Yes | 4 | 1 | |
| HRGMv2_0430_CGC12 | CGCFAM_03514 | Yes | 3 | 1 | |
| HRGMv2_0430_CGC18 | CGCFAM_04306 | Yes | 9 | 4 | |
| HRGMv2_0430_CGC3 | CGCFAM_06001 | Yes | 5 | 1 | |
| HRGMv2_0430_CGC15 | CGCFAM_09683 | Yes | 3 | 2 |
Top CAZyme Families