PROTEIN: HRGMv2_0430_39_16
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Protein File & Metadata
Source:
HRGMv2_0430_39_16.pdb
Genome ID:
Protein ID:
HRGMv2_0430_39_16
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Protein Sequence
MDNANKRIAR NTIYMYVRLL TTMVISFYIS RLALELLGVS DYGLFAVVGG VLAIFMFISG 60 SLAGATSRFF NIEMGKERGD VNACFNVNLT LHVALALIVF LLAETVGLWY IYNHLNVAAG 120 RLDDAAFVYE VSIATACIGI VNTPYQSLLT SHEQFGFLAV VDIANSLIRM FAILTLMYVS 180 SGNALRLYSI IFALTTVTNF VAYHVVAYVK WRDIIRFRFI RDWSRYKEVL SFNNWNLLAT 240 MAYMANNSGT DLLFNAFFGT AMNGAFAVSK MVKQGIMNFT GNFDNASAPQ IIQAYAAGDK 300 ERYTFLCHKI GRINILLFEL MCFPLLMELD FVLHLWLGKV PDDVYMLTFL CIIQGGVALT 360 CGGIYNLINA TGRIKWFKIN VSFFFLICLP LGYVLFRMGA APYTLIGLFI VADVAQRIVQ 420 LILMHHILDF DAWQYARSAY LRPGIIALVM AAALYLRASI HIDTTLMHLL SLLITFVLTL 480 LLIYIIGLTD EERMALRKRL HV 502
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CWT9-F1-model_v4 | 1 | 501 | 1 | 469 | 0.8274 |
0.8734 |
| AF-Q0PAP8-F1-model_v4 | 1 | 430 | 2 | 433 | 0.8206 |
0.9046 |
| AF-P71616-F1-model_v4 | 1 | 430 | 5 | 434 | 0.8073 |
0.8918 |
| AF-A0A0H3GGV5-F1-model_v4 | 1 | 431 | 3 | 434 | 0.8066 |
0.8887 |
| AF-Q8ZKH8-F1-model_v4 | 1 | 431 | 4 | 435 | 0.8054 |
0.8901 |
| AF-Q8DPQ6-F1-model_v4 | 1 | 432 | 4 | 446 | 0.8043 |
0.8984 |
| AF-Q9HUY9-F1-model_v4 | 1 | 431 | 10 | 441 | 0.8009 |
0.8964 |
| AF-O25454-F1-model_v4 | 22 | 430 | 1 | 411 | 0.8003 |
0.9024 |
| AF-V9H0I2-F1-model_v4 | 1 | 432 | 1 | 426 | 0.7999 |
0.8797 |
| AF-Q8DNG1-F1-model_v4 | 1 | 434 | 11 | 447 | 0.7992 |
0.8917 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 499 | 4 | 508 | 0.6949 |
0.7371 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 499 | 37 | 545 | 0.6566 |
0.7117 |
| AF-F2NKF2-F1-model_v4 | GT4 | 2 | 498 | 1 | 592 | 0.6483 |
0.8475 |
| QJC17489.1 | GT2 | 1 | 502 | 339 | 846 | 0.634 |
0.8033 |
| QNU38870.1 | GT4 | 3 | 502 | 1 | 479 | 0.6202 |
0.7242 |
| A0A1S9M4N4 | GT2 | 2 | 434 | 225 | 693 | 0.607 |
0.8247 |
| A0A9W6NQN0 | GT2 | 1 | 430 | 19 | 420 | 0.6016 |
0.8664 |
| AF-D7BDH0-F1-model_v4 | GT4 | 2 | 495 | 1 | 480 | 0.592 |
0.7954 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 502 | 5 | 758 | 0.5776 |
0.7404 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 502 | 1 | 589 | 0.5649 |
0.7323 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 499 | 4 | 508 | 0.6949 |
0.7371 |
| A0A160T2N7 | GT28 | 1 | 499 | 37 | 545 | 0.6566 |
0.7117 |
| F2NKF2 | GT4 | 2 | 498 | 1 | 592 | 0.6483 |
0.8475 |
| QJC17489.1 | GT2 | 1 | 502 | 339 | 846 | 0.634 |
0.8033 |
| QNU38870.1 | GT4 | 3 | 502 | 1 | 479 | 0.6202 |
0.7242 |
| WBL35586.1 | GT4 | 1 | 502 | 204 | 800 | 0.6197 |
0.7696 |
| A0A1S9M4N4 | GT2 | 2 | 434 | 225 | 693 | 0.607 |
0.8247 |
| A0A9W6NQN0 | GT2 | 1 | 430 | 19 | 420 | 0.6016 |
0.8664 |
| D7BDH0 | GT4 | 2 | 495 | 1 | 480 | 0.592 |
0.7954 |
| A0A517Z2I8 | GT2 | 1 | 502 | 5 | 758 | 0.5776 |
0.7404 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fv8-assembly1.cif.gz_B | 1 | 432 | 9 | 436 | 0.7965 |
0.8822 |
| 6z70-assembly1.cif.gz_A | 1 | 432 | 6 | 444 | 0.7964 |
0.882 |
| 6ids-assembly1.cif.gz_A | 1 | 431 | 3 | 433 | 0.7942 |
0.8763 |
| 7php-assembly1.cif.gz_A | 1 | 431 | 4 | 446 | 0.793 |
0.8907 |
| 3vvo-assembly1.cif.gz_A | 1 | 432 | 10 | 443 | 0.7923 |
0.8812 |
| 6fv7-assembly1.cif.gz_B | 1 | 432 | 1 | 416 | 0.7901 |
0.8781 |
| 6z71-assembly1.cif.gz_A | 1 | 431 | 3 | 418 | 0.7896 |
0.881 |
| 6fv6-assembly1.cif.gz_A | 2 | 431 | 1 | 405 | 0.7896 |
0.8888 |
| 3w4t-assembly1.cif.gz_A | 1 | 432 | 8 | 444 | 0.7864 |
0.8744 |
| 4z3p-assembly1.cif.gz_A | 1 | 430 | 8 | 424 | 0.7862 |
0.8865 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PJB9-F1-model_v4 | 1 | 501 | 2 | 536 | 0.8384 |
0.8826 |
| AF-Q9Z7H5-F1-model_v4 | 1 | 502 | 2 | 539 | 0.8318 |
0.8821 |
| AF-Q46378-F1-model_v4 | 1 | 502 | 2 | 536 | 0.8316 |
0.8747 |
| AF-Q5KZL2-F1-model_v4 | 1 | 432 | 5 | 447 | 0.8139 |
0.91 |
| AF-Q6HLG9-F1-model_v4 | 1 | 432 | 4 | 447 | 0.8138 |
0.9079 |
| AF-Q8CUL5-F1-model_v4 | 1 | 432 | 4 | 447 | 0.8136 |
0.9027 |
| AF-Q81G28-F1-model_v4 | 1 | 432 | 4 | 447 | 0.8124 |
0.9056 |
| AF-Q63DZ4-F1-model_v4 | 1 | 432 | 4 | 447 | 0.8122 |
0.9062 |
| AF-O31855-F1-model_v4 | 1 | 432 | 4 | 447 | 0.8108 |
0.9042 |
| AF-Q81T85-F1-model_v4 | 1 | 432 | 4 | 447 | 0.8105 |
0.9048 |