Cluster: HRGMv2_0420_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0420
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0420_6 | HRGMv2_0420_6_44 | 49745 | 50740 | - | 3.A.1.13.2 |
| TC | HRGMv2_0420_6 | HRGMv2_0420_6_45 | 50740 | 51882 | - | 3.A.1.13.2 |
| NULL(UNKNOWN) | HRGMv2_0420_6 | HRGMv2_0420_6_46 | 51879 | 53006 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0420_6 | HRGMv2_0420_6_47 | 53062 | 54864 | - | TonB_dep_Rec_b-barrel | Plug | OMP_b-brl_3 |
| TC | HRGMv2_0420_6 | HRGMv2_0420_6_48 | 55236 | 56042 | + | 3.A.1.13.2 |
| STP | HRGMv2_0420_6 | HRGMv2_0420_6_49 | 56032 | 57522 | - | Pyr_redox_2 |
| pfam | HRGMv2_0420_6 | HRGMv2_0420_6_50 | 57519 | 58280 | - | DHODB_Fe-S_bind |
| TC | HRGMv2_0420_6 | HRGMv2_0420_6_51 | 58393 | 60969 | - | 1.B.14.6.14 |
| CAZyme | HRGMv2_0420_6 | HRGMv2_0420_6_52 | 61079 | 61939 | - | GT2 |
| CAZyme | HRGMv2_0420_6 | HRGMv2_0420_6_53 | 62061 | 63146 | - | GT4 |
| CAZyme | HRGMv2_0420_6 | HRGMv2_0420_6_54 | 63154 | 64194 | - | GT2 |
| pfam | HRGMv2_0420_6 | HRGMv2_0420_6_55 | 64238 | 65371 | - | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_0420_6 | HRGMv2_0420_6_56 | 65374 | 66297 | - | GT2 |
Gene ID: HRGMv2_0420_6_44
Type: TC
Location: 49745 - 50740 (-)
Type: TC
Location: 49745 - 50740 (-)
Gene ID: HRGMv2_0420_6_45
Type: TC
Location: 50740 - 51882 (-)
Type: TC
Location: 50740 - 51882 (-)
Gene ID: HRGMv2_0420_6_46
Type:
Location: 51879 - 53006 (-)
Type:
Location: 51879 - 53006 (-)
Gene ID: HRGMv2_0420_6_47
Type: pfam
Location: 53062 - 54864 (-)
Type: pfam
Location: 53062 - 54864 (-)
Gene ID: HRGMv2_0420_6_48
Type: TC
Location: 55236 - 56042 (+)
Type: TC
Location: 55236 - 56042 (+)
Gene ID: HRGMv2_0420_6_49
Type: STP
Location: 56032 - 57522 (-)
Type: STP
Location: 56032 - 57522 (-)
Gene ID: HRGMv2_0420_6_50
Type: pfam
Location: 57519 - 58280 (-)
Type: pfam
Location: 57519 - 58280 (-)
Gene ID: HRGMv2_0420_6_51
Type: TC
Location: 58393 - 60969 (-)
Type: TC
Location: 58393 - 60969 (-)
Gene ID: HRGMv2_0420_6_52
Type: CAZyme
Location: 61079 - 61939 (-)
Type: CAZyme
Location: 61079 - 61939 (-)
Gene ID: HRGMv2_0420_6_53
Type: CAZyme
Location: 62061 - 63146 (-)
Type: CAZyme
Location: 62061 - 63146 (-)
Gene ID: HRGMv2_0420_6_54
Type: CAZyme
Location: 63154 - 64194 (-)
Type: CAZyme
Location: 63154 - 64194 (-)
Gene ID: HRGMv2_0420_6_55
Type: pfam
Location: 64238 - 65371 (-)
Type: pfam
Location: 64238 - 65371 (-)
Gene ID: HRGMv2_0420_6_56
Type: CAZyme
Location: 65374 - 66297 (-)
Type: CAZyme
Location: 65374 - 66297 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.