dbCAN Logo

PROTEIN: HRGMv2_0420_6_46

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0420_6_46.pdb
Genome ID:
HRGMv2_0420
Protein ID:
HRGMv2_0420_6_46

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKYLYLTAA   SIAMLGLASC   SEDDGPSVPD   PDYPTVSEGV   YVLNQGNFYN   AVPGGLNVVD 60
YNSSQTAKNV   FEQVNGRSIG   DTPQCGVAYG   SKIYVGTDGS   NTIEILDRND   YKSIKQIRLA 120
EDGVDGTQPR   CMIPHNGKIY   MSMYDGYVAR   FDTLTMKFDK   AVKVGPNPEI   MALRDGKLYV 180
PNSDGMNWAV   GYGKTASIVD   VESMTVTGTF   EVPENPAEFY   SGEDGLYLLC   KGNYKPETDP 240
DFSPSALYKV   EKTVENGKEV   YKNVLIAKAT   IAALGNGVIY   FVNQPFTNDV   PKAEYYVYDM 300
QSGEVSDWKV   TAVDYPSNIA   VDKVGGRILV   SSYVMNGPYP   SYDAPGYLNV   YSTDNALVRK 360
YEIGAGPTCI   FFNTK 375
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I1M1R3-F1-model_v4 29 375 3 312 0.7272 0.8182
AF-F4IIK6-F1-model_v4 36 375 9 313 0.7237 0.8229
AF-G4V788-F1-model_v4 35 375 6 312 0.7145 0.8133
AF-A0A1D3PDA8-F1-model_v4 34 353 21 291 0.7006 0.8565
AF-A0A3P7PSI3-F1-model_v4 40 356 1 297 0.6932 0.794
AF-Q5XIA9-F1-model_v4 35 355 28 352 0.6907 0.7971
AF-Q8IYD2-F1-model_v4 35 355 28 349 0.6906 0.7935
AF-Q9D2D9-F1-model_v4 36 356 29 353 0.6903 0.797
AF-Q91XA8-F1-model_v4 35 356 28 350 0.6902 0.7903
AF-F2Z3R0-F1-model_v4 35 356 28 350 0.6898 0.7897
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1M7MDA2-F1-model_v4 PL25 34 365 57 469 0.5935 0.755
AF-A0A3Q9HQR3-F1-model_v4 CBM50 36 375 158 468 0.5815 0.7825
QIB47538.1 CBM13 33 375 1 328 0.5764 0.7965
AF-A0A7G8X1Z5-F1-model_v4 CBM50 36 375 157 469 0.5384 0.7908
AF-Q67JA2-F1-model_v4 CBM50 28 375 106 434 0.5315 0.6677
AF-A0A0B5EIV7-F1-model_v4 GH20 14 368 372 815 0.5224 0.7572
UDF04997.1 GH74 32 366 45 415 0.5207 0.7659
AF-F4BYX4-F1-model_v4 GH73 61 375 240 529 0.5181 0.7875
AF-A0A6F8YXI1-F1-model_v4 CBM2 1 358 1 524 0.5169 0.6922
A0A7R8CGG6 GT31 34 356 127 407 0.5165 0.8278
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A3Q9HQR3 CBM50 36 375 158 468 0.5815 0.7825
QIB47538.1 CBM13 33 375 1 328 0.5764 0.7965
A0A5C0ZDH1 PL42 34 354 94 479 0.5745 0.7549
A0A0H4P7Q6 GH33 11 375 118 712 0.5596 0.7593
A0A7G8X1Z5 CBM50 36 375 157 469 0.5384 0.7908
Q67JA2 CBM50 28 375 106 434 0.5315 0.6677
BDG61813.1 CBM50 28 375 77 430 0.524 0.631
A0A0B5EIV7 GH20 14 368 372 815 0.5224 0.7572
UDF04997.1 GH74 32 366 45 415 0.5207 0.7659
A0A077R9T4 GH43_21 1 375 4 332 0.5188 0.5894
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8okv-assembly4.cif.gz_D 36 373 2 322 0.7882 0.8634
3dsm-assembly1.cif.gz_A 37 375 1 322 0.7865 0.8656
8era-assembly1.cif.gz_C 36 375 4 308 0.7185 0.8106
7som-assembly1.cif.gz_d 32 354 11 295 0.7026 0.8257
7seu-assembly4.cif.gz_D 34 353 18 315 0.6983 0.8139
3hfq-assembly2.cif.gz_B 36 374 1 341 0.6957 0.7516
7seu-assembly1.cif.gz_A 33 353 17 322 0.6949 0.7982
5nuv-assembly1.cif.gz_A 36 375 1 282 0.6939 0.8322
8a3w-assembly1.cif.gz_Sg 32 354 20 290 0.6933 0.8466
8fkv-assembly1.cif.gz_NQ 36 375 7 316 0.692 0.7911
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9LV27-F1-model_v4 29 374 3 305 0.7369 0.8322
AF-P41318-F1-model_v4 36 375 1 303 0.7339 0.8269
AF-Q9AYE4-F1-model_v4 29 375 3 312 0.7264 0.8171
AF-F4IIK6-F1-model_v4 36 375 9 313 0.7237 0.8229
AF-O74453-F1-model_v4 37 375 1 290 0.7031 0.8725
AF-Q54S59-F1-model_v4 61 375 1 279 0.6974 0.8419
AF-Q5RCW7-F1-model_v4 35 356 28 353 0.691 0.7949
AF-Q5XIA9-F1-model_v4 35 355 28 352 0.6907 0.7971
AF-Q8IYD2-F1-model_v4 35 355 28 349 0.6906 0.7935
AF-Q9D2D9-F1-model_v4 36 356 29 353 0.6903 0.797
Download Full SwissProt Results