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Cluster: HRGMv2_0389_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_14 HRGMv2_0389_14_37 47099 50224 + 1.B.14.6.1
pfam HRGMv2_0389_14 HRGMv2_0389_14_38 50248 52017 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0389_14 HRGMv2_0389_14_39 52284 54116 + GH32
TC HRGMv2_0389_14 HRGMv2_0389_14_40 54138 55301 + 2.A.1.7.17
STP HRGMv2_0389_14 HRGMv2_0389_14_41 55314 56204 + PfkB
TC HRGMv2_0389_14 HRGMv2_0389_14_42 56434 57756 + 2.A.33.1.2
TF HRGMv2_0389_14 HRGMv2_0389_14_43 57888 61946 + HTH_AraC
pfam HRGMv2_0389_14 HRGMv2_0389_14_44 61971 62984 - YceG
CAZyme HRGMv2_0389_14 HRGMv2_0389_14_45 63252 64790 + GH51_1
NULL(UNKNOWN) HRGMv2_0389_14 HRGMv2_0389_14_46 65111 65281 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0389_14 HRGMv2_0389_14_47 65441 66433 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0389_14 HRGMv2_0389_14_48 66462 67517 + 3.A.1.7.1
TC HRGMv2_0389_14 HRGMv2_0389_14_49 67537 68394 + 3.A.1.7.1
TC HRGMv2_0389_14 HRGMv2_0389_14_50 68416 69285 + 3.A.1.7.1
TC HRGMv2_0389_14 HRGMv2_0389_14_51 69273 70043 + 3.A.1.7.2
pfam HRGMv2_0389_14 HRGMv2_0389_14_52 70176 70781 + Formyl_trans_N
TC HRGMv2_0389_14 HRGMv2_0389_14_53 71331 74627 + 1.B.14.6.1
Gene ID: HRGMv2_0389_14_37
Type: TC
Location: 47099 - 50224 (+)
Gene ID: HRGMv2_0389_14_38
Type: pfam
Location: 50248 - 52017 (+)
Gene ID: HRGMv2_0389_14_39
Type: CAZyme
Location: 52284 - 54116 (+)
Gene ID: HRGMv2_0389_14_40
Type: TC
Location: 54138 - 55301 (+)
Gene ID: HRGMv2_0389_14_41
Type: STP
Location: 55314 - 56204 (+)
Gene ID: HRGMv2_0389_14_42
Type: TC
Location: 56434 - 57756 (+)
Gene ID: HRGMv2_0389_14_43
Type: TF
Location: 57888 - 61946 (+)
Gene ID: HRGMv2_0389_14_44
Type: pfam
Location: 61971 - 62984 (-)
Gene ID: HRGMv2_0389_14_45
Type: CAZyme
Location: 63252 - 64790 (+)
Gene ID: HRGMv2_0389_14_46
Type:
Location: 65111 - 65281 (+)
Gene ID: HRGMv2_0389_14_47
Type:
Location: 65441 - 66433 (+)
Gene ID: HRGMv2_0389_14_48
Type: TC
Location: 66462 - 67517 (+)
Gene ID: HRGMv2_0389_14_49
Type: TC
Location: 67537 - 68394 (+)
Gene ID: HRGMv2_0389_14_50
Type: TC
Location: 68416 - 69285 (+)
Gene ID: HRGMv2_0389_14_51
Type: TC
Location: 69273 - 70043 (+)
Gene ID: HRGMv2_0389_14_52
Type: pfam
Location: 70176 - 70781 (+)
Gene ID: HRGMv2_0389_14_53
Type: TC
Location: 71331 - 74627 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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