PROTEIN: HRGMv2_0389_14_47
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Protein File & Metadata
Source:
HRGMv2_0389_14_47.pdb
Genome ID:
Protein ID:
HRGMv2_0389_14_47
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Protein Sequence
MINRWIIAGV IGCMALPVSA SKKGEKEKED SKKGQAIITI FSDFHTGFGT ANDDRGFDLD 60 RAYIGYQYSL PHGLQLKAVM DFGQSKEVGD YQRIGYVKNA LVTWKHGNWT LNGGLISTTQ 120 FKTQEDFWGK RYIMKSFQDE YKFGSSADLA VSAAYRFNKY VSADVILANG EGYKKVQVKD 180 GLQYGAGVSV TPVKGLILRA YGSFNEASED GQKGITNLAA FAGYKHERFS VAAEYNYQTN 240 ASYTDGQDQS GVSAYATIKC NKNIGVFGRW DYLTSKNDWN LSDDGMAGVV GAEFKLGKYI 300 KLAPNFRVWS PKQADLPNRF YGYLNASFSL 330
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43839-F1-model_v4 | 20 | 330 | 2 | 359 | 0.7591 |
0.8546 |
| AF-P02932-F1-model_v4 | 24 | 330 | 1 | 351 | 0.7469 |
0.842 |
| AF-A0A0H3GIV3-F1-model_v4 | 23 | 330 | 1 | 350 | 0.7464 |
0.8388 |
| AF-P30705-F1-model_v4 | 23 | 330 | 1 | 350 | 0.7423 |
0.8334 |
| AF-Q5F5V7-F1-model_v4 | 16 | 330 | 8 | 348 | 0.7402 |
0.8116 |
| AF-P37432-F1-model_v4 | 28 | 330 | 26 | 363 | 0.7389 |
0.8551 |
| AF-P02931-F1-model_v4 | 23 | 330 | 1 | 362 | 0.7385 |
0.842 |
| AF-Q32E50-F1-model_v4 | 23 | 330 | 1 | 362 | 0.7369 |
0.8401 |
| AF-Q8ZPH7-F1-model_v4 | 22 | 330 | 1 | 372 | 0.7333 |
0.8434 |
| AF-P21420-F1-model_v4 | 21 | 330 | 1 | 365 | 0.7317 |
0.8324 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wi5-assembly1.cif.gz_A | 33 | 330 | 1 | 312 | 0.773 |
0.8474 |
| 3wi4-assembly1.cif.gz_A | 33 | 330 | 1 | 309 | 0.7725 |
0.8426 |
| 5o78-assembly1.cif.gz_C | 30 | 330 | 1 | 331 | 0.763 |
0.8522 |
| 4aui-assembly1.cif.gz_C | 33 | 330 | 1 | 308 | 0.7622 |
0.8319 |
| 6ehe-assembly1.cif.gz_A | 30 | 330 | 1 | 302 | 0.7607 |
0.8154 |
| 1pho-assembly1.cif.gz_A | 28 | 330 | 5 | 330 | 0.7594 |
0.8424 |
| 4kr4-assembly1.cif.gz_C | 29 | 330 | 4 | 334 | 0.7594 |
0.8504 |
| 6ene-assembly1.cif.gz_C | 28 | 330 | 5 | 329 | 0.7585 |
0.8405 |
| 5o77-assembly1.cif.gz_A | 29 | 330 | 5 | 337 | 0.7584 |
0.8511 |
| 4kr8-assembly1.cif.gz_B | 28 | 330 | 4 | 340 | 0.7582 |
0.8528 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P30690-F1-model_v4 | 25 | 330 | 13 | 331 | 0.7619 |
0.8381 |
| AF-P57042-F1-model_v4 | 25 | 330 | 13 | 329 | 0.7617 |
0.8358 |
| AF-Q48221-F1-model_v4 | 20 | 330 | 1 | 353 | 0.7606 |
0.8501 |
| AF-P30689-F1-model_v4 | 25 | 330 | 13 | 331 | 0.7604 |
0.8367 |
| AF-P30688-F1-model_v4 | 25 | 330 | 13 | 331 | 0.7594 |
0.8356 |
| AF-P43839-F1-model_v4 | 20 | 330 | 2 | 359 | 0.7591 |
0.8546 |
| AF-P30687-F1-model_v4 | 25 | 330 | 13 | 331 | 0.7579 |
0.8341 |
| AF-E6MZM0-F1-model_v4 | 25 | 330 | 13 | 331 | 0.7569 |
0.8331 |
| AF-P05430-F1-model_v4 | 25 | 330 | 13 | 326 | 0.7567 |
0.8275 |
| AF-P20149-F1-model_v4 | 19 | 330 | 1 | 361 | 0.756 |
0.85 |