Cluster: HRGMv2_0378_CGC55
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_00061
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_62 | HRGMv2_0378_62_2 | 1045 | 3531 | + | GT2 |
| pfam | HRGMv2_0378_62 | HRGMv2_0378_62_3 | 3574 | 4896 | + | SpoIID |
| NULL(UNKNOWN) | HRGMv2_0378_62 | HRGMv2_0378_62_4 | 4893 | 6212 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0378_62 | HRGMv2_0378_62_5 | 6264 | 7562 | + | 2.A.1.25.5 |
| CAZyme | HRGMv2_0378_62 | HRGMv2_0378_62_6 | 7632 | 9353 | + | GH43_10 |
Gene ID: HRGMv2_0378_62_2
Type: CAZyme
Location: 1045 - 3531 (+)
Type: CAZyme
Location: 1045 - 3531 (+)
Gene ID: HRGMv2_0378_62_3
Type: pfam
Location: 3574 - 4896 (+)
Type: pfam
Location: 3574 - 4896 (+)
Gene ID: HRGMv2_0378_62_4
Type:
Location: 4893 - 6212 (+)
Type:
Location: 4893 - 6212 (+)
Gene ID: HRGMv2_0378_62_5
Type: TC
Location: 6264 - 7562 (+)
Type: TC
Location: 6264 - 7562 (+)
Gene ID: HRGMv2_0378_62_6
Type: CAZyme
Location: 7632 - 9353 (+)
Type: CAZyme
Location: 7632 - 9353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.