PROTEIN: HRGMv2_0378_62_4
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Protein File & Metadata
Source:
HRGMv2_0378_62_4.pdb
Genome ID:
Protein ID:
HRGMv2_0378_62_4
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Protein Sequence
MINHLVLDYI KSAGVKRISP WIWIPGLFCA QGIPTAIFTF VSLLMFIRFD VGYSLATVFM 60 SMLFVPSVLK SFFRSRIRLI RNYKLSINIV EGLIFVTLCA MALSTHSHNA SPESLFIWMF 120 LISMLCSWHE LLARMYYEKT LNLRDRIYFY KVKTFATLST LILTYGVIII LVGFLEIFFR 180 NIPHAWSMAC YIMAGVFLLF FLVNIFLPPR RPLHLGVSAS ESSLYGSVKT DARILDRMMR 240 RKYSMRTFFF MFILMLPQAL MFNTRVFFLL ASSDDGGLGC SIQDIGFAQG TVGVIGFSAG 300 ILLGRMLLRR YGAFRTFWPM VIAVGLSPLL YLIMTLHNPE TLGQLSVMTF LAQFLFGFGL 360 NISIMFVAYI SDDRYQSTIN YLYIPFVAAS MIVPMMLSGW LVTVMGFTRF FLLNALCAPL 420 AWVIFAVTGA RHCYVRKIR 439
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z6J0-F1-model_v4 | 16 | 436 | 7 | 412 | 0.8243 |
0.879 |
| AF-K0F2J1-F1-model_v4 | 7 | 439 | 7 | 412 | 0.8162 |
0.8718 |
| AF-A0A0H3GMD9-F1-model_v4 | 17 | 437 | 11 | 397 | 0.8161 |
0.8944 |
| AF-B6F255-F1-model_v4 | 6 | 439 | 1 | 418 | 0.8113 |
0.8591 |
| AF-Q2G1R0-F1-model_v4 | 17 | 439 | 6 | 404 | 0.8096 |
0.8735 |
| AF-Q58955-F1-model_v4 | 15 | 432 | 2 | 386 | 0.8053 |
0.8777 |
| AF-Q9HVG9-F1-model_v4 | 4 | 439 | 1 | 403 | 0.8048 |
0.8578 |
| AF-I1MG86-F1-model_v4 | 9 | 439 | 1 | 432 | 0.8045 |
0.8356 |
| AF-P21503-F1-model_v4 | 11 | 439 | 1 | 379 | 0.8042 |
0.8833 |
| AF-Q32E16-F1-model_v4 | 11 | 439 | 1 | 379 | 0.8033 |
0.8825 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S189-F1-model_v4 | GH3 | 1 | 439 | 1 | 413 | 0.8022 |
0.8516 |
| WBC00074.1 | CBM42 , GH2 | 1 | 439 | 1 | 490 | 0.7469 |
0.8234 |
| A0A9W8R2E6 | GH88 | 2 | 439 | 34 | 515 | 0.6978 |
0.7734 |
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 4 | 439 | 6 | 535 | 0.6857 |
0.7845 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 11 | 439 | 17 | 467 | 0.6641 |
0.7394 |
| AF-A0A1Y0MVF8-F1-model_v4 | GH17 | 8 | 439 | 2 | 459 | 0.6317 |
0.8269 |
| AF-L7WC43-F1-model_v4 | GH17 | 4 | 439 | 2 | 456 | 0.6293 |
0.8158 |
| AF-A0A7L5FXW1-F1-model_v4 | GH17 | 4 | 439 | 1 | 457 | 0.6287 |
0.8158 |
| AF-A0A1G5E1B9-F1-model_v4 | GH17 | 3 | 439 | 2 | 457 | 0.6277 |
0.8129 |
| AF-A0A2K8X8V5-F1-model_v4 | GH17 | 4 | 439 | 1 | 457 | 0.6267 |
0.8133 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A2S189 | GH3 | 1 | 439 | 1 | 413 | 0.8022 |
0.8516 |
| WBC00074.1 | CBM42 , GH2 | 1 | 439 | 1 | 490 | 0.7469 |
0.8234 |
| A0A9W8R2E6 | GH88 | 2 | 439 | 34 | 515 | 0.6978 |
0.7734 |
| A0A160T6G0 | CBM9 | 4 | 439 | 6 | 535 | 0.6857 |
0.7845 |
| VEC51885.1 | GH2 | 1 | 439 | 178 | 730 | 0.6202 |
0.7904 |
| K4IH60 | GH17 | 7 | 439 | 7 | 533 | 0.6102 |
0.8226 |
| BEI93633.1 | AA6 | 1 | 439 | 15 | 551 | 0.6027 |
0.7713 |
| A0A4P7NHB9 | GH131 | 7 | 439 | 64 | 616 | 0.5939 |
0.8108 |
| A0A8S2AMJ5 | CE8 | 1 | 439 | 285 | 853 | 0.5836 |
0.7778 |
| A0A7H1AHD7 | GH43_1 | 6 | 439 | 4 | 483 | 0.5761 |
0.7658 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6kkk-assembly3.cif.gz_C | 17 | 439 | 1 | 381 | 0.8038 |
0.8784 |
| 6kkl-assembly1.cif.gz_A | 18 | 438 | 1 | 372 | 0.7991 |
0.8819 |
| 7dla-assembly1.cif.gz_A | 18 | 431 | 1 | 402 | 0.7854 |
0.8388 |
| 8jtc-assembly1.cif.gz_A | 18 | 439 | 1 | 391 | 0.7782 |
0.8418 |
| 8g92-assembly1.cif.gz_A | 17 | 439 | 1 | 407 | 0.7765 |
0.8324 |
| 7yub-assembly1.cif.gz_R | 10 | 439 | 1 | 419 | 0.7763 |
0.8242 |
| 7dl9-assembly2.cif.gz_B | 18 | 433 | 1 | 405 | 0.7752 |
0.8267 |
| 8ex6-assembly1.cif.gz_A | 18 | 439 | 1 | 408 | 0.7737 |
0.8289 |
| 6kkj-assembly1.cif.gz_B | 19 | 434 | 1 | 357 | 0.7725 |
0.8692 |
| 8ex4-assembly1.cif.gz_A | 18 | 439 | 1 | 409 | 0.7724 |
0.8266 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1RIL0-F1-model_v4 | 17 | 437 | 1 | 410 | 0.8504 |
0.8928 |
| AF-Q92HQ3-F1-model_v4 | 17 | 436 | 3 | 417 | 0.8475 |
0.887 |
| AF-Q4UL88-F1-model_v4 | 17 | 436 | 3 | 441 | 0.8285 |
0.88 |
| AF-Q9ZD69-F1-model_v4 | 7 | 436 | 1 | 443 | 0.8223 |
0.8565 |
| AF-B2VKI2-F1-model_v4 | 9 | 439 | 1 | 394 | 0.8087 |
0.8713 |
| AF-Q58955-F1-model_v4 | 15 | 432 | 2 | 386 | 0.8053 |
0.8777 |
| AF-A9MHY5-F1-model_v4 | 11 | 439 | 1 | 379 | 0.8047 |
0.8838 |
| AF-B7MS16-F1-model_v4 | 11 | 439 | 1 | 379 | 0.8045 |
0.8836 |
| AF-P21503-F1-model_v4 | 11 | 439 | 1 | 379 | 0.8042 |
0.8833 |
| AF-B7UMY7-F1-model_v4 | 11 | 439 | 1 | 379 | 0.8041 |
0.8834 |