Cluster: HRGMv2_0378_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_00523
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_5 | HRGMv2_0378_5_83 | 124637 | 125671 | + | 8.A.1.1.1 |
| NULL(UNKNOWN) | HRGMv2_0378_5 | HRGMv2_0378_5_84 | 125676 | 127199 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0378_5 | HRGMv2_0378_5_85 | 127406 | 128575 | - | DUF6057 | DUF6057 |
| CAZyme | HRGMv2_0378_5 | HRGMv2_0378_5_86 | 128565 | 130703 | - | GH13_8 |
Gene ID: HRGMv2_0378_5_83
Type: TC
Location: 124637 - 125671 (+)
Type: TC
Location: 124637 - 125671 (+)
Gene ID: HRGMv2_0378_5_84
Type:
Location: 125676 - 127199 (+)
Type:
Location: 125676 - 127199 (+)
Gene ID: HRGMv2_0378_5_85
Type: pfam
Location: 127406 - 128575 (-)
Type: pfam
Location: 127406 - 128575 (-)
Gene ID: HRGMv2_0378_5_86
Type: CAZyme
Location: 128565 - 130703 (-)
Type: CAZyme
Location: 128565 - 130703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.