PROTEIN: HRGMv2_0378_5_84
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Protein File & Metadata
Source:
HRGMv2_0378_5_84.pdb
Genome ID:
Protein ID:
HRGMv2_0378_5_84
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Protein Sequence
MRRLRLSGRP KVIYFKDNVP LGVCMFLSLF FAMVFQFNGG VFLPASVQMS SALGCIQEDI 60 TMAGYASFIG MTIIFPILFR LKTRFTTRSI FMTVCPILIL CNIINLHTEN IYILIAVCFV 120 SGFFRMWGTF ECFSNVRLSV TPSGNFSVFY PIIYIIVLES IQLSGLVTIQ ISDWANWRYM 180 HWFVIGMLAV VWLLVFLLTK SARIQRKTPL YGIDWLGGTM WCAMLFCIVF ICIYGDYYDW 240 FDNIRIRICT VGAVVLLMLN INRMNSVRRP YISPKVFRYR HFPTILVLFL MLCLLLTTSS 300 VLQERFMRSI LNFDMLNAIS INWYVFVGIL AGSGIVFYRR VVLKKGFKFL ISIGFILMVV 360 YQYYMYFLID PNLNIESLYF PNFLKGVGYG ILYIALTIYV AKAVPFEHFF QGLCVLSFIR 420 TSTATPLGTA ILNRWLRILQ TDNIGLLGRK IDQSENVSVH DFYAEVVRQT TLTSLKELFG 480 YVCIVGTVFL VIVLSYRMWR KIHFHEE 507
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 1 | 507 | 1 | 500 | 0.8412 |
0.8712 |
| AF-Q5F680-F1-model_v4 | 4 | 507 | 2 | 501 | 0.8357 |
0.8609 |
| AF-P0AEJ0-F1-model_v4 | 1 | 507 | 1 | 506 | 0.8285 |
0.8521 |
| AF-P52600-F1-model_v4 | 11 | 507 | 7 | 507 | 0.8258 |
0.8644 |
| AF-A0A133CZJ2-F1-model_v4 | 5 | 507 | 1 | 482 | 0.8187 |
0.864 |
| AF-Q9I482-F1-model_v4 | 1 | 507 | 1 | 473 | 0.8174 |
0.8678 |
| AF-A0A0H3GPJ5-F1-model_v4 | 1 | 506 | 1 | 470 | 0.8173 |
0.8688 |
| AF-Q8ZMK8-F1-model_v4 | 5 | 507 | 4 | 502 | 0.8158 |
0.8504 |
| AF-Q9I4A2-F1-model_v4 | 6 | 507 | 3 | 503 | 0.8143 |
0.8388 |
| AF-Q9HZ88-F1-model_v4 | 25 | 507 | 1 | 491 | 0.8129 |
0.8617 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 1 | 507 | 7 | 536 | 0.746 |
0.7995 |
| AF-A2S189-F1-model_v4 | GH3 | 1 | 507 | 4 | 412 | 0.6685 |
0.7656 |
| ARF89445.1 | GT1 | 1 | 507 | 267 | 957 | 0.6656 |
0.8748 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 2 | 506 | 15 | 465 | 0.6638 |
0.7487 |
| A0A9W8R2E6 | GH88 | 1 | 507 | 37 | 516 | 0.6171 |
0.6737 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 7 | 507 | 29 | 523 | 0.6151 |
0.8288 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 507 | 354 | 835 | 0.5627 |
0.7383 |
| AF-A0A7L5FXW1-F1-model_v4 | GH17 | 2 | 507 | 1 | 458 | 0.5622 |
0.7532 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 5 | 504 | 2 | 461 | 0.5622 |
0.7509 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 7 | 504 | 9 | 461 | 0.5614 |
0.7604 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 1 | 507 | 7 | 536 | 0.746 |
0.7995 |
| A2S189 | GH3 | 1 | 507 | 4 | 412 | 0.6685 |
0.7656 |
| ARF89445.1 | GT1 | 1 | 507 | 267 | 957 | 0.6656 |
0.8748 |
| WBC00074.1 | CBM42 , GH2 | 1 | 507 | 46 | 489 | 0.6197 |
0.7269 |
| A0A9W8R2E6 | GH88 | 1 | 507 | 37 | 516 | 0.6171 |
0.6737 |
| A0A387HHJ8 | GT1 | 7 | 507 | 29 | 523 | 0.6151 |
0.8288 |
| A0A7H8RF34 | CBM24 | 1 | 506 | 280 | 754 | 0.5581 |
0.725 |
| A0A3C1RID2 | GH17 | 7 | 504 | 7 | 459 | 0.5555 |
0.7531 |
| A0A918L8E6 | GT2 | 9 | 506 | 1 | 468 | 0.5534 |
0.6896 |
| A0A9Q9RZ67 | GH78 | 1 | 507 | 741 | 1444 | 0.5468 |
0.8174 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 9 | 507 | 1 | 483 | 0.7827 |
0.8218 |
| 7y58-assembly1.cif.gz_A | 10 | 507 | 7 | 505 | 0.777 |
0.8124 |
| 8pnl-assembly2.cif.gz_C | 9 | 507 | 1 | 486 | 0.7743 |
0.8111 |
| 7d5p-assembly2.cif.gz_B | 24 | 507 | 1 | 413 | 0.7473 |
0.8398 |
| 7d5p-assembly1.cif.gz_A | 22 | 507 | 1 | 408 | 0.7473 |
0.8435 |
| 7d5q-assembly2.cif.gz_B | 24 | 506 | 1 | 411 | 0.7442 |
0.8381 |
| 7d5q-assembly1.cif.gz_A | 24 | 506 | 1 | 403 | 0.74 |
0.8397 |
| 6kkl-assembly1.cif.gz_A | 19 | 507 | 1 | 372 | 0.7275 |
0.8525 |
| 8b1j-assembly1.cif.gz_A | 20 | 507 | 1 | 451 | 0.7193 |
0.7807 |
| 6oom-assembly2.cif.gz_A-2 | 15 | 500 | 1 | 392 | 0.7153 |
0.823 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 4 | 507 | 2 | 501 | 0.8359 |
0.8631 |
| AF-P0DPR7-F1-model_v4 | 5 | 507 | 3 | 512 | 0.8335 |
0.8616 |
| AF-P0AEJ1-F1-model_v4 | 1 | 507 | 1 | 503 | 0.8305 |
0.8589 |
| AF-P0AEJ0-F1-model_v4 | 1 | 507 | 1 | 506 | 0.8285 |
0.8521 |
| AF-P52600-F1-model_v4 | 11 | 507 | 7 | 507 | 0.8258 |
0.8644 |
| AF-P44927-F1-model_v4 | 11 | 507 | 7 | 509 | 0.8249 |
0.8614 |
| AF-P32369-F1-model_v4 | 5 | 507 | 4 | 476 | 0.8142 |
0.8645 |
| AF-Q8Y9K8-F1-model_v4 | 9 | 507 | 9 | 471 | 0.8044 |
0.8654 |
| AF-P96712-F1-model_v4 | 3 | 501 | 1 | 498 | 0.802 |
0.8356 |
| AF-O35018-F1-model_v4 | 8 | 501 | 10 | 474 | 0.8014 |
0.8653 |