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Cluster: HRGMv2_0353_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0353_13 HRGMv2_0353_13_49 48897 50564 - 4.C.1.1.4
pfam HRGMv2_0353_13 HRGMv2_0353_13_50 50781 51665 + DHDPS
peptidase HRGMv2_0353_13 HRGMv2_0353_13_51 51863 52783 - S09.UPW
CAZyme HRGMv2_0353_13 HRGMv2_0353_13_52 53098 55554 + GH13_6
NULL(UNKNOWN) HRGMv2_0353_13 HRGMv2_0353_13_53 55675 55773 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0353_13 HRGMv2_0353_13_54 55912 57216 + OEP | OEP
TC HRGMv2_0353_13 HRGMv2_0353_13_55 57213 58247 + 8.A.1.1.2
NULL(UNKNOWN) HRGMv2_0353_13 HRGMv2_0353_13_56 58351 59844 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0353_13 HRGMv2_0353_13_57 59895 61463 + DUF6377
CAZyme HRGMv2_0353_13 HRGMv2_0353_13_58 61619 63718 + GH97
Gene ID: HRGMv2_0353_13_49
Type: TC
Location: 48897 - 50564 (-)
Gene ID: HRGMv2_0353_13_50
Type: pfam
Location: 50781 - 51665 (+)
Gene ID: HRGMv2_0353_13_51
Type: peptidase
Location: 51863 - 52783 (-)
Gene ID: HRGMv2_0353_13_52
Type: CAZyme
Location: 53098 - 55554 (+)
Gene ID: HRGMv2_0353_13_53
Type:
Location: 55675 - 55773 (+)
Gene ID: HRGMv2_0353_13_54
Type: pfam
Location: 55912 - 57216 (+)
Gene ID: HRGMv2_0353_13_55
Type: TC
Location: 57213 - 58247 (+)
Gene ID: HRGMv2_0353_13_56
Type:
Location: 58351 - 59844 (+)
Gene ID: HRGMv2_0353_13_57
Type: pfam
Location: 59895 - 61463 (+)
Gene ID: HRGMv2_0353_13_58
Type: CAZyme
Location: 61619 - 63718 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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