PROTEIN: HRGMv2_0353_13_56
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Protein File & Metadata
Source:
HRGMv2_0353_13_56.pdb
Genome ID:
Protein ID:
HRGMv2_0353_13_56
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Protein Sequence
MIVQFSGGVY LAAASDMVGT TALMQEDILM AGYSQLIGMA INFAVMFRIK FRFSNRTQLL 60 VSAIVLSGAN AVCTRTDSAL TLTMVSFVAG WFRMQATFAC NSTIQLWLTP VRDMSVFFCY 120 VYLVVDGVIQ LSGLSAVYTA FAGHWADMQI IMSGLLTLMM IMVIAFVRPV HVPLHIPLLG 180 IDWLGALLWS GFMMSYTFIC VYGSYFDWWA APEIRGAALA ATACLGVNLW RATFLHHPYI 240 SFMAMRNRNV VRATGLYLVF FTLLATEHVF EHTYAINILG FDETNTADLN WYVFAGILAG 300 VGFTYLTFAR RRWRYKTMTA ISFGLAAVYL AYFYLLIDYG VEKEALVIPL FFRGAASVIL 360 SIVLLTSIVQ SGLPFTVFPQ ALTINGFTGA VMGATFGPAI VGEMLRHILA RNISQIWSGT 420 SGTGMGLGEL YGLVSRHALA VTIKEIYGLL LIVCLISLGI IIVSYGPMKP AAIFPKWRTI 480 RRLLRHNVRQ TKALPAD 497
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32DH7-F1-model_v4 | 1 | 467 | 24 | 504 | 0.8025 |
0.8791 |
| AF-Q9HZ88-F1-model_v4 | 1 | 467 | 5 | 485 | 0.8005 |
0.8673 |
| AF-G3XD81-F1-model_v4 | 1 | 467 | 20 | 497 | 0.7994 |
0.8746 |
| AF-Q2FVL1-F1-model_v4 | 11 | 467 | 1 | 443 | 0.7932 |
0.8636 |
| AF-Q9I4A2-F1-model_v4 | 1 | 467 | 17 | 502 | 0.7908 |
0.8607 |
| AF-A0A0H3GU91-F1-model_v4 | 1 | 465 | 18 | 498 | 0.7838 |
0.8634 |
| AF-Q8ZMK8-F1-model_v4 | 1 | 465 | 18 | 498 | 0.7835 |
0.863 |
| AF-A0A0H3GPJ5-F1-model_v4 | 1 | 469 | 17 | 467 | 0.7833 |
0.8577 |
| AF-A0A133CZJ2-F1-model_v4 | 1 | 467 | 24 | 478 | 0.7828 |
0.8627 |
| AF-Q9I008-F1-model_v4 | 1 | 467 | 34 | 519 | 0.7823 |
0.871 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 1 | 490 | 24 | 546 | 0.7176 |
0.7863 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 1 | 467 | 35 | 462 | 0.6298 |
0.738 |
| ARF89445.1 | GT1 | 1 | 466 | 470 | 949 | 0.6264 |
0.8804 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 1 | 466 | 50 | 516 | 0.589 |
0.8287 |
| AF-A0A7G8WFN5-F1-model_v4 | GH17 | 1 | 466 | 9 | 442 | 0.5416 |
0.7526 |
| AF-A0A1Y0M8J3-F1-model_v4 | GH17 | 1 | 466 | 20 | 452 | 0.5396 |
0.7538 |
| AF-W8VNY0-F1-model_v4 | GH17 | 1 | 466 | 18 | 450 | 0.5395 |
0.752 |
| AF-A0A024FEX3-F1-model_v4 | GH17 | 1 | 466 | 22 | 454 | 0.5393 |
0.7525 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 471 | 379 | 824 | 0.5311 |
0.7388 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 493 | 326 | 774 | 0.5295 |
0.7163 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 1 | 490 | 24 | 546 | 0.7176 |
0.7863 |
| ARF89445.1 | GT1 | 1 | 466 | 470 | 949 | 0.6264 |
0.8804 |
| A0A387HHJ8 | GT1 | 1 | 466 | 50 | 516 | 0.589 |
0.8287 |
| A0A918L8E6 | GT2 | 1 | 497 | 15 | 564 | 0.5545 |
0.6482 |
| A0A3C1RID2 | GH17 | 1 | 497 | 21 | 605 | 0.5521 |
0.6829 |
| A0A7H8RF34 | CBM24 | 1 | 493 | 326 | 774 | 0.5295 |
0.7163 |
| S5VEU6 | CE14 | 1 | 495 | 31 | 803 | 0.5258 |
0.6588 |
| A0A9Q9RZ67 | GH78 | 1 | 497 | 966 | 1467 | 0.5218 |
0.7844 |
| A0A7H8QT70 | GH27 | 1 | 497 | 132 | 980 | 0.5058 |
0.6851 |
| F9G000 | GH3 | 1 | 467 | 69 | 548 | 0.5055 |
0.7994 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 1 | 465 | 12 | 481 | 0.7714 |
0.829 |
| 8pnl-assembly2.cif.gz_C | 1 | 465 | 12 | 484 | 0.7628 |
0.8227 |
| 7y58-assembly1.cif.gz_A | 1 | 467 | 22 | 502 | 0.7532 |
0.8269 |
| 7d5p-assembly2.cif.gz_B | 1 | 467 | 7 | 413 | 0.7294 |
0.8242 |
| 7d5p-assembly1.cif.gz_A | 1 | 467 | 9 | 408 | 0.7276 |
0.8299 |
| 7d5q-assembly2.cif.gz_B | 1 | 467 | 7 | 411 | 0.7265 |
0.8227 |
| 7d5q-assembly1.cif.gz_A | 1 | 467 | 7 | 403 | 0.7199 |
0.8227 |
| 6kkl-assembly1.cif.gz_A | 1 | 469 | 12 | 370 | 0.6918 |
0.8316 |
| 6euq-assembly1.cif.gz_A | 1 | 469 | 9 | 386 | 0.6857 |
0.8037 |
| 6kkj-assembly1.cif.gz_B | 1 | 469 | 10 | 357 | 0.6841 |
0.829 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0DPR7-F1-model_v4 | 1 | 467 | 24 | 509 | 0.8026 |
0.8789 |
| AF-Q9RQ29-F1-model_v4 | 1 | 467 | 19 | 498 | 0.8013 |
0.8739 |
| AF-P32369-F1-model_v4 | 1 | 467 | 21 | 470 | 0.7991 |
0.8784 |
| AF-P0AEJ1-F1-model_v4 | 1 | 467 | 20 | 500 | 0.7877 |
0.8654 |
| AF-P0AEJ0-F1-model_v4 | 1 | 467 | 20 | 500 | 0.7868 |
0.8644 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 466 | 21 | 468 | 0.7852 |
0.862 |
| AF-P44927-F1-model_v4 | 1 | 467 | 24 | 504 | 0.7844 |
0.8608 |
| AF-P52600-F1-model_v4 | 1 | 467 | 24 | 504 | 0.7842 |
0.862 |
| AF-Q92EE1-F1-model_v4 | 1 | 466 | 21 | 468 | 0.7829 |
0.8596 |
| AF-O35018-F1-model_v4 | 1 | 466 | 23 | 473 | 0.7803 |
0.8584 |