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Cluster: HRGMv2_0329_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_7 HRGMv2_0329_7_82 97830 100877 + 1.B.14.6.2
pfam HRGMv2_0329_7 HRGMv2_0329_7_83 100890 102380 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0329_7 HRGMv2_0329_7_84 102443 104023 + GH144
TC HRGMv2_0329_7 HRGMv2_0329_7_85 104135 106483 - 8.A.3.2.3
pfam HRGMv2_0329_7 HRGMv2_0329_7_86 106511 107308 - Poly_export | SLBB | SLBB_2
CAZyme HRGMv2_0329_7 HRGMv2_0329_7_87 107429 108133 - GT26
NULL(UNKNOWN) HRGMv2_0329_7 HRGMv2_0329_7_88 108115 109326 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0329_7 HRGMv2_0329_7_89 109327 110661 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0329_7 HRGMv2_0329_7_90 110658 111686 - GT4
pfam HRGMv2_0329_7 HRGMv2_0329_7_91 111692 112888 - EpsG
CAZyme HRGMv2_0329_7 HRGMv2_0329_7_92 112885 113868 - GT2
Gene ID: HRGMv2_0329_7_82
Type: TC
Location: 97830 - 100877 (+)
Gene ID: HRGMv2_0329_7_83
Type: pfam
Location: 100890 - 102380 (+)
Gene ID: HRGMv2_0329_7_84
Type: CAZyme
Location: 102443 - 104023 (+)
Gene ID: HRGMv2_0329_7_85
Type: TC
Location: 104135 - 106483 (-)
Gene ID: HRGMv2_0329_7_86
Type: pfam
Location: 106511 - 107308 (-)
Gene ID: HRGMv2_0329_7_87
Type: CAZyme
Location: 107429 - 108133 (-)
Gene ID: HRGMv2_0329_7_88
Type:
Location: 108115 - 109326 (-)
Gene ID: HRGMv2_0329_7_89
Type:
Location: 109327 - 110661 (-)
Gene ID: HRGMv2_0329_7_90
Type: CAZyme
Location: 110658 - 111686 (-)
Gene ID: HRGMv2_0329_7_91
Type: pfam
Location: 111692 - 112888 (-)
Gene ID: HRGMv2_0329_7_92
Type: CAZyme
Location: 112885 - 113868 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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