PROTEIN: HRGMv2_0329_7_88
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Protein File & Metadata
Source:
HRGMv2_0329_7_88.pdb
Genome ID:
Protein ID:
HRGMv2_0329_7_88
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Protein Sequence
MKTNLLNSFQ SLRKYCESEK FKGWDPYDGL NSKVFQALPF FKKSAICRLI MIQGFKRSPF 60 NLRRLMLVPK GYNAKGIGLF LQGYCNLYKA VTENPLLENS LGTAEELKQQ INELAELLIS 120 LQSNGYSGAC WGYNFDWQAR RLFLFPKFTP TVVATNFCAT ALIDAYEITE NKRYLDIALS 180 AAKFVMNDLH RADYNGGFLF SYSPLKGNDT VFNASLLGSK LLSYCYRYTG NEAYRDAARQ 240 SVVACCNGQS DDGSWVYGML PVQSWIDSFH TGYNLDGLIA YEEQTGDTSF QTNIEKGFDF 300 YINNFFLEDG SPKYYHNRQY PIDIHCPGQL FVTLSRLHRF DEYKKLAEKV LDWTIKNMQD 360 KKGYFYYQLK PGISSRISYM RWSNAFMFNA LSYYILSQCK TIE 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NBR6-F1-model_v4 | 1 | 400 | 14 | 382 | 0.7005 |
0.7618 |
| AF-C1H4M4-F1-model_v4 | 1 | 401 | 17 | 384 | 0.6905 |
0.7552 |
| AF-A0A175W9U6-F1-model_v4 | 1 | 399 | 26 | 393 | 0.6845 |
0.7569 |
| AF-Q59XS8-F1-model_v4 | 1 | 398 | 39 | 412 | 0.6749 |
0.7485 |
| AF-B0S6K7-F1-model_v4 | 1 | 403 | 7 | 399 | 0.667 |
0.708 |
| AF-U7Q402-F1-model_v4 | 1 | 398 | 29 | 428 | 0.6629 |
0.709 |
| AF-P51606-F1-model_v4 | 1 | 403 | 19 | 410 | 0.6536 |
0.712 |
| AF-A0A1D8PFZ7-F1-model_v4 | 2 | 397 | 84 | 447 | 0.643 |
0.7575 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D1C7D3-F1-model_v4 | GH76 | 1 | 398 | 5 | 349 | 0.7483 |
0.8276 |
| AF-A0A386HNT8-F1-model_v4 | GH76 | 1 | 399 | 42 | 399 | 0.7435 |
0.8435 |
| AF-A0A1Q2HN47-F1-model_v4 | GH76 | 1 | 403 | 10 | 360 | 0.7412 |
0.8186 |
| A0A4Q7MQQ1 | GH76 | 1 | 402 | 21 | 360 | 0.7409 |
0.8431 |
| AF-A0A6I4HZL1-F1-model_v4 | GH76 | 1 | 398 | 44 | 402 | 0.7383 |
0.8391 |
| AF-A0A1W6EBY8-F1-model_v4 | GH76 | 1 | 398 | 41 | 403 | 0.7376 |
0.8309 |
| AF-A0A858RQI1-F1-model_v4 | GH76 | 1 | 401 | 14 | 362 | 0.7375 |
0.8329 |
| AF-I0KBV6-F1-model_v4 | GH76 | 1 | 398 | 44 | 404 | 0.7371 |
0.8354 |
| AF-A0A5B8UVH7-F1-model_v4 | GH76 | 1 | 403 | 22 | 360 | 0.7364 |
0.8396 |
| AF-A0A5B8W5H8-F1-model_v4 | GH76 | 1 | 402 | 22 | 358 | 0.7334 |
0.8389 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1C7D3 | GH76 | 1 | 398 | 5 | 349 | 0.7483 |
0.8276 |
| A0A4Q7MQQ1 | GH76 | 1 | 402 | 21 | 360 | 0.7409 |
0.8431 |
| A0A068NWE0 | GH76 | 1 | 400 | 14 | 360 | 0.738 |
0.8231 |
| A0A3T2KGU8 | GH76 | 1 | 399 | 2 | 342 | 0.7376 |
0.8179 |
| A0A858RQI1 | GH76 | 1 | 401 | 14 | 362 | 0.7375 |
0.8329 |
| A0A0P0NMG4 | GH76 | 15 | 399 | 1 | 316 | 0.7338 |
0.839 |
| A0A6P2FGT8 | GH105 | 2 | 402 | 3 | 343 | 0.7324 |
0.8136 |
| A0A416HUP6 | GH76 | 1 | 402 | 1 | 339 | 0.7311 |
0.8119 |
| A0A3S6Z4Q5 | GH76 | 1 | 400 | 5 | 353 | 0.7279 |
0.803 |
| A0A1W6LJG0 | GH76 | 1 | 403 | 24 | 375 | 0.7279 |
0.8203 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4v1s-assembly1.cif.gz_A | 1 | 402 | 5 | 359 | 0.7483 |
0.817 |
| 3k7x-assembly1.cif.gz_A | 1 | 403 | 2 | 346 | 0.7381 |
0.8168 |
| 4mu9-assembly2.cif.gz_B | 1 | 398 | 1 | 359 | 0.7357 |
0.7971 |
| 4mu9-assembly1.cif.gz_A | 1 | 398 | 1 | 360 | 0.7355 |
0.796 |
| 5zhb-assembly1.cif.gz_A | 1 | 400 | 3 | 380 | 0.7267 |
0.7725 |
| 5zhb-assembly2.cif.gz_B | 1 | 400 | 3 | 379 | 0.7261 |
0.773 |
| 7d5g-assembly1.cif.gz_A | 1 | 400 | 5 | 389 | 0.7133 |
0.7535 |
| 3wkf-assembly1.cif.gz_A | 1 | 403 | 12 | 406 | 0.7121 |
0.7501 |
| 3vw5-assembly3.cif.gz_C | 1 | 402 | 1 | 388 | 0.712 |
0.7478 |
| 7nl5-assembly1.cif.gz_A | 1 | 397 | 1 | 335 | 0.7067 |
0.7917 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5LH66-F1-model_v4 | 1 | 400 | 4 | 392 | 0.7142 |
0.7496 |
| AF-P0DKY4-F1-model_v4 | 1 | 402 | 1 | 389 | 0.7134 |
0.7476 |
| AF-E6UB41-F1-model_v4 | 1 | 402 | 1 | 388 | 0.7129 |
0.7487 |
| AF-F8WRK9-F1-model_v4 | 1 | 403 | 13 | 408 | 0.7073 |
0.7473 |
| AF-B3XZI5-F1-model_v4 | 1 | 402 | 2 | 404 | 0.7047 |
0.7289 |
| AF-B8DZK4-F1-model_v4 | 1 | 400 | 7 | 389 | 0.7024 |
0.7462 |
| AF-P29954-F1-model_v4 | 1 | 402 | 6 | 387 | 0.6953 |
0.7405 |
| AF-P51606-F1-model_v4 | 1 | 403 | 19 | 410 | 0.6536 |
0.712 |
| AF-Q2KIS1-F1-model_v4 | 1 | 403 | 19 | 410 | 0.6483 |
0.7097 |
| AF-T2KPL9-F1-model_v4 | 1 | 402 | 27 | 377 | 0.6368 |
0.7224 |