Cluster: HRGMv2_0312_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0312
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0312_3 | HRGMv2_0312_3_103 | 132301 | 134502 | - | GH3 |
| TF | HRGMv2_0312_3 | HRGMv2_0312_3_104 | 134529 | 135218 | + | GerE |
| CAZyme | HRGMv2_0312_3 | HRGMv2_0312_3_105 | 135113 | 136444 | - | CE7 |
| NULL(UNKNOWN) | HRGMv2_0312_3 | HRGMv2_0312_3_106 | 136429 | 138576 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0312_3 | HRGMv2_0312_3_107 | 138598 | 140100 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0312_3 | HRGMv2_0312_3_108 | 140124 | 143576 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0312_3 | HRGMv2_0312_3_109 | 143585 | 145354 | - | GH5_39 |
Gene ID: HRGMv2_0312_3_103
Type: CAZyme
Location: 132301 - 134502 (-)
Type: CAZyme
Location: 132301 - 134502 (-)
Gene ID: HRGMv2_0312_3_104
Type: TF
Location: 134529 - 135218 (+)
Type: TF
Location: 134529 - 135218 (+)
Gene ID: HRGMv2_0312_3_105
Type: CAZyme
Location: 135113 - 136444 (-)
Type: CAZyme
Location: 135113 - 136444 (-)
Gene ID: HRGMv2_0312_3_106
Type:
Location: 136429 - 138576 (-)
Type:
Location: 136429 - 138576 (-)
Gene ID: HRGMv2_0312_3_107
Type: pfam
Location: 138598 - 140100 (-)
Type: pfam
Location: 138598 - 140100 (-)
Gene ID: HRGMv2_0312_3_108
Type: TC
Location: 140124 - 143576 (-)
Type: TC
Location: 140124 - 143576 (-)
Gene ID: HRGMv2_0312_3_109
Type: CAZyme
Location: 143585 - 145354 (-)
Type: CAZyme
Location: 143585 - 145354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.