PROTEIN: HRGMv2_0312_3_106
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Protein File & Metadata
Source:
HRGMv2_0312_3_106.pdb
Genome ID:
Protein ID:
HRGMv2_0312_3_106
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Protein Sequence
MSTRRILAAV LTLSVAAGTV SAHTFYCVEP GGADGKGIQC DITVEKVENR EIVHVVMRNL 60 RHTPFQPVKA GIRLGVDTYM DRYPEWNDKY FPTMMVCEPT HCYGYMQSPS GKVKAIVSDS 120 PVASWSLDYN LGYMEPEPYW FYGHRINSLN LDLLSTQPQP DRHPQGCREL EAGESREWTL 180 QLIDIDGPDN FEKTVHYAAG VPVPMMSRTS CRPGEPVEIT IYGHNPKVKD GPRELPVRAM 240 GHDTWNFIFR QANPGIYELE INDGDRQTHG YVNVTRPWNE IIRTARREAL RCRQKATSHV 300 ESWYGFHTAF LAARYFPDHE PDSALNARFD MVTAAVFNPE SGRQNRYEWR IQNAFSTAGM 360 LVDRYEAYGN KKDLLTAERI ADRVISDSQR ADGAFMNGQT DYSAVIYPAK SLLELADAEY 420 AASRRSRGRK YEKAAQKAID RLVALDGNFN TEGEITYEDG MVSCAALQMG AMALRCKDAD 480 KRRRYREAML KLLEGHDCLT QLRVADGRRR GGTMRFWEAQ YDVHIQPNMI SSPHGWSAWR 540 AYATYYAWLL TGDEKWLAQT FDAAASFAAL VDFDTHRLNW AFVVDPAVNV RQIAVPDSTL 600 TVDTPSYGCP HPDMYPHADY TIGERYVPMI SDWQTMVSSD NDVHEVFKFI AEAVLTNAFV 660 VERRDGSLGC YNCSASLEDG VLTVIADEPQ MTNLYVSSDS DFKVNFNGKV ICIGR 715
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 5 | 715 | 18 | 895 | 0.6708 |
0.7589 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 12 | 688 | 9 | 629 | 0.7519 |
0.8195 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 10 | 713 | 1 | 640 | 0.7509 |
0.8029 |
| AF-E0S376-F1-model_v4 | PL27 | 11 | 692 | 1 | 593 | 0.7424 |
0.8206 |
| A0A416I060 | PL27 | 9 | 689 | 1 | 651 | 0.742 |
0.7872 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 10 | 672 | 12 | 663 | 0.7383 |
0.789 |
| A0A975CYI3 | PL27 | 10 | 654 | 8 | 598 | 0.7371 |
0.821 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 11 | 693 | 12 | 619 | 0.7369 |
0.8128 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 6 | 673 | 20 | 643 | 0.7369 |
0.809 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 6 | 687 | 20 | 655 | 0.7352 |
0.8003 |
| AF-A0A0A7I1G9-F1-model_v4 | PL27 | 6 | 673 | 20 | 655 | 0.7319 |
0.7969 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 12 | 688 | 9 | 629 | 0.7519 |
0.8195 |
| A0A516PYA3 | PL27 | 10 | 713 | 1 | 640 | 0.7509 |
0.8029 |
| E0S376 | PL27 | 11 | 692 | 1 | 593 | 0.7424 |
0.8206 |
| A0A416I060 | PL27 | 9 | 689 | 1 | 651 | 0.742 |
0.7872 |
| A0A2S0KVT5 | PL27 | 10 | 672 | 12 | 663 | 0.7383 |
0.789 |
| A0A975CYI3 | PL27 | 10 | 654 | 8 | 598 | 0.7371 |
0.821 |
| F5Y9B7 | PL27 | 11 | 693 | 12 | 619 | 0.7369 |
0.8128 |
| A0A6I5ZZU4 | PL27 | 11 | 693 | 29 | 716 | 0.7262 |
0.7706 |
| A0A174T7R5 | PL27 | 10 | 673 | 34 | 690 | 0.7255 |
0.7839 |
| E3QS34 | PL27 | 10 | 713 | 17 | 702 | 0.7252 |
0.7594 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 10 | 657 | 9 | 669 | 0.7291 |
0.7874 |
| 5nok-assembly1.cif.gz_A | 10 | 657 | 13 | 668 | 0.7225 |
0.7797 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.