Cluster: HRGMv2_0311_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0311
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0311_5 | HRGMv2_0311_5_45 | 52407 | 54176 | + | GH5_39 |
| TC | HRGMv2_0311_5 | HRGMv2_0311_5_46 | 54185 | 57637 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0311_5 | HRGMv2_0311_5_47 | 57667 | 59169 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0311_5 | HRGMv2_0311_5_48 | 59191 | 61338 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0311_5 | HRGMv2_0311_5_49 | 61323 | 62654 | + | CE7 |
| TF | HRGMv2_0311_5 | HRGMv2_0311_5_50 | 62549 | 63238 | - | GerE |
| CAZyme | HRGMv2_0311_5 | HRGMv2_0311_5_51 | 63265 | 65466 | + | GH3 |
Gene ID: HRGMv2_0311_5_45
Type: CAZyme
Location: 52407 - 54176 (+)
Type: CAZyme
Location: 52407 - 54176 (+)
Gene ID: HRGMv2_0311_5_46
Type: TC
Location: 54185 - 57637 (+)
Type: TC
Location: 54185 - 57637 (+)
Gene ID: HRGMv2_0311_5_47
Type: pfam
Location: 57667 - 59169 (+)
Type: pfam
Location: 57667 - 59169 (+)
Gene ID: HRGMv2_0311_5_48
Type:
Location: 59191 - 61338 (+)
Type:
Location: 59191 - 61338 (+)
Gene ID: HRGMv2_0311_5_49
Type: CAZyme
Location: 61323 - 62654 (+)
Type: CAZyme
Location: 61323 - 62654 (+)
Gene ID: HRGMv2_0311_5_50
Type: TF
Location: 62549 - 63238 (-)
Type: TF
Location: 62549 - 63238 (-)
Gene ID: HRGMv2_0311_5_51
Type: CAZyme
Location: 63265 - 65466 (+)
Type: CAZyme
Location: 63265 - 65466 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.