PROTEIN: HRGMv2_0311_5_48
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Protein File & Metadata
Source:
HRGMv2_0311_5_48.pdb
Genome ID:
Protein ID:
HRGMv2_0311_5_48
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Protein Sequence
MSTRRILAAV LTLSVAAHTV AAHTFYCVEP GGADGKGIQC DITVEKVENR EIVHVVMRNL 60 RHTPFQPVKA GIRLGVDTYM DRYPEWNDKY FPTMMVCEPT HCYGYMQSPS GTVKAIVSDS 120 PVASWSLDYN LGYMEPEPYW FYGHRIKSLN LDLLSTQPQP DRHPRGCREL EAGESREWTL 180 QLIDIDGPDD FEKTVHYAAG VPVPMMSRTS CRPGEPIEIT IYGHNPKVKD GSRELPGQAM 240 GNDTWSFVFR QDNPGIYELE INDGDRQTHG YVNVTRPWNE IIRTARREAL RCRQKASSHV 300 ESWYGFHTAF LAARYFPDHE PDSALNARFD MVAAAVFNPE SGRQNRYEWR IQNAFSTVGM 360 LVDRYEAYGN KKDLLTAERI ADRVISDSQR ADGAFMNGQT DYSAVIYPAK SLLELADAEY 420 AASRRSRGRK YEKAAQKAID RLVALDGNFN TEGEITYEDG MVSCAALQMG AMALRCKDAD 480 KRRRYRDAML KLLEGHDCLT QLRVADGRRR GGTMRFWEAQ YDVHIQPNMI SSPHGWSAWR 540 AYATYYAWLL TGDEKWLAQT FDAAASFAAL VDFDTHRLNW AFVVDPAVNV RQIAVPDSTL 600 TADTPSYGCP HPDMFPHADY TIGERYVPMI SDWQTMVSSD NDVHEVFKFV AEAVLTNAFV 660 VERRDGSLGC YNCSASLEDG VLTVIADEPQ MTNLYVSSDS DFKVNFNGKV ICIGR 715
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 7 | 715 | 23 | 895 | 0.6692 |
0.7591 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A516PYA3-F1-model_v4 | PL27 | 8 | 713 | 1 | 640 | 0.7563 |
0.8088 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 8 | 688 | 9 | 629 | 0.7556 |
0.8234 |
| AF-E0S376-F1-model_v4 | PL27 | 8 | 692 | 1 | 593 | 0.7468 |
0.8253 |
| A0A416I060 | PL27 | 5 | 689 | 5 | 651 | 0.7407 |
0.7905 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 7 | 672 | 13 | 663 | 0.7402 |
0.7924 |
| A0A975CYI3 | PL27 | 7 | 654 | 9 | 598 | 0.7398 |
0.8255 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 7 | 693 | 13 | 619 | 0.7389 |
0.8167 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 1 | 693 | 22 | 716 | 0.7364 |
0.7711 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 16 | 673 | 7 | 643 | 0.736 |
0.7927 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 16 | 673 | 6 | 655 | 0.7348 |
0.7832 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A516PYA3 | PL27 | 8 | 713 | 1 | 640 | 0.7563 |
0.8088 |
| A0A5P8M7F3 | PL27 | 8 | 688 | 9 | 629 | 0.7556 |
0.8234 |
| E0S376 | PL27 | 8 | 692 | 1 | 593 | 0.7468 |
0.8253 |
| A0A416I060 | PL27 | 5 | 689 | 5 | 651 | 0.7407 |
0.7905 |
| A0A2S0KVT5 | PL27 | 7 | 672 | 13 | 663 | 0.7402 |
0.7924 |
| A0A975CYI3 | PL27 | 7 | 654 | 9 | 598 | 0.7398 |
0.8255 |
| F5Y9B7 | PL27 | 7 | 693 | 13 | 619 | 0.7389 |
0.8167 |
| A0A6I5ZZU4 | PL27 | 1 | 693 | 22 | 716 | 0.7364 |
0.7711 |
| E3QS34 | PL27 | 7 | 713 | 17 | 702 | 0.7276 |
0.7621 |
| A0A174T7R5 | PL27 | 7 | 673 | 35 | 690 | 0.7271 |
0.7868 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 7 | 657 | 10 | 669 | 0.7308 |
0.786 |
| 5nok-assembly1.cif.gz_A | 7 | 657 | 14 | 668 | 0.7244 |
0.7786 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.