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Cluster: HRGMv2_0300_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0300_6 HRGMv2_0300_6_38 54427 55971 - GH30_3
pfam HRGMv2_0300_6 HRGMv2_0300_6_39 55983 57503 - SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_0300_6 HRGMv2_0300_6_40 57529 58458 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0300_6 HRGMv2_0300_6_41 58498 60519 - 1.B.14.6.1
pfam HRGMv2_0300_6 HRGMv2_0300_6_42 60817 62520 + DUF6377
peptidase HRGMv2_0300_6 HRGMv2_0300_6_43 62963 64141 + I04.UPW
TC HRGMv2_0300_6 HRGMv2_0300_6_44 64329 66728 - 1.B.14.10.2
pfam HRGMv2_0300_6 HRGMv2_0300_6_45 66940 67533 - Aminotran_4
pfam HRGMv2_0300_6 HRGMv2_0300_6_46 67502 68488 - Chorismate_bind
TC HRGMv2_0300_6 HRGMv2_0300_6_47 69124 70587 - 2.A.1.1.3
Gene ID: HRGMv2_0300_6_38
Type: CAZyme
Location: 54427 - 55971 (-)
Gene ID: HRGMv2_0300_6_39
Type: pfam
Location: 55983 - 57503 (-)
Gene ID: HRGMv2_0300_6_40
Type:
Location: 57529 - 58458 (-)
Gene ID: HRGMv2_0300_6_41
Type: TC
Location: 58498 - 60519 (-)
Gene ID: HRGMv2_0300_6_42
Type: pfam
Location: 60817 - 62520 (+)
Gene ID: HRGMv2_0300_6_43
Type: peptidase
Location: 62963 - 64141 (+)
Gene ID: HRGMv2_0300_6_44
Type: TC
Location: 64329 - 66728 (-)
Gene ID: HRGMv2_0300_6_45
Type: pfam
Location: 66940 - 67533 (-)
Gene ID: HRGMv2_0300_6_46
Type: pfam
Location: 67502 - 68488 (-)
Gene ID: HRGMv2_0300_6_47
Type: TC
Location: 69124 - 70587 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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