PROTEIN: HRGMv2_0300_6_40
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Protein File & Metadata
Source:
HRGMv2_0300_6_40.pdb
Genome ID:
Protein ID:
HRGMv2_0300_6_40
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Protein Sequence
MLRNRLTFYF DIYYKKTSDM LMSITLPAGS AAARSLTYNG GEIVNKGIEL AVSSKNLVGN 60 LKWNTDFNIS FNRNKLTRLD LVPVYWGAST NSNVGQSVVR NAVGHPLGSF WGYIADGVDS 120 ETGDMIYRDV NEDGIVSASD RTYIGDPNPD FIFGLTNTFS YKGFNLSILL QGSVGNDIYN 180 VSRMDSEGMF DGRNQTTRVL ERWRVPGQKT DVPRVGFNQQ NSTYYLEDGS YLRVKDITLS 240 YDIPRSILKK MYLTRLMPYI SFNNLLTFTN YSGRDPEVNQ YGNSGGIQGI DWGTYPLSRS 300 FVLGLKVEF 309
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223HUM7 | GH35 | 1 | 309 | 1150 | 1571 | 0.5609 |
0.9439 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223HUM7 | GH35 | 1 | 309 | 1150 | 1571 | 0.5609 |
0.9439 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6z8i-assembly1.cif.gz_B | 1 | 309 | 403 | 807 | 0.5989 |
0.8709 |
| 8aa4-assembly1.cif.gz_B | 1 | 309 | 559 | 871 | 0.5868 |
0.8714 |
| 6sln-assembly1.cif.gz_B | 1 | 309 | 532 | 902 | 0.5785 |
0.8673 |
| 6slj-assembly1.cif.gz_A | 1 | 309 | 532 | 898 | 0.5765 |
0.8636 |
| 6sm3-assembly1.cif.gz_B | 1 | 309 | 532 | 903 | 0.5737 |
0.8608 |
| 6sli-assembly1.cif.gz_B | 1 | 309 | 532 | 900 | 0.5712 |
0.8565 |
| 8a9y-assembly1.cif.gz_I | 1 | 309 | 529 | 903 | 0.5682 |
0.8519 |
| 6zlt-assembly1.cif.gz_B-2 | 1 | 309 | 529 | 933 | 0.561 |
0.8483 |
| 6sml-assembly1.cif.gz_B | 1 | 309 | 544 | 911 | 0.5606 |
0.843 |
| 5fq8-assembly1.cif.gz_D | 1 | 309 | 540 | 941 | 0.5442 |
0.8248 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KPJ3-F1-model_v4 | 1 | 309 | 606 | 1001 | 0.5979 |
0.9195 |
| AF-T2KM18-F1-model_v4 | 1 | 309 | 594 | 990 | 0.5939 |
0.9106 |
| AF-T2KMI3-F1-model_v4 | 1 | 309 | 618 | 1038 | 0.5839 |
0.9055 |
| AF-Q8A1G1-F1-model_v4 | 1 | 309 | 625 | 1003 | 0.5551 |
0.8542 |