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Cluster: HRGMv2_0297_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_64 83318 84028 - GT32
pfam HRGMv2_0297_11 HRGMv2_0297_11_65 84033 84947 - Lip_A_acyltrans
TC HRGMv2_0297_11 HRGMv2_0297_11_66 84991 86907 + 3.A.1.106.1
NULL(UNKNOWN) HRGMv2_0297_11 HRGMv2_0297_11_67 87057 87224 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_68 87217 88182 + GT8
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_69 88195 89172 + GT2
NULL(UNKNOWN) HRGMv2_0297_11 HRGMv2_0297_11_70 89174 91117 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_71 91139 92122 - GT2
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_72 92164 93087 - GT8
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_73 93098 94009 - GT2
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_74 94016 94861 - GT11
CAZyme HRGMv2_0297_11 HRGMv2_0297_11_75 94858 96324 - GT2
Gene ID: HRGMv2_0297_11_64
Type: CAZyme
Location: 83318 - 84028 (-)
Gene ID: HRGMv2_0297_11_65
Type: pfam
Location: 84033 - 84947 (-)
Gene ID: HRGMv2_0297_11_66
Type: TC
Location: 84991 - 86907 (+)
Gene ID: HRGMv2_0297_11_67
Type:
Location: 87057 - 87224 (+)
Gene ID: HRGMv2_0297_11_68
Type: CAZyme
Location: 87217 - 88182 (+)
Gene ID: HRGMv2_0297_11_69
Type: CAZyme
Location: 88195 - 89172 (+)
Gene ID: HRGMv2_0297_11_70
Type:
Location: 89174 - 91117 (-)
Gene ID: HRGMv2_0297_11_71
Type: CAZyme
Location: 91139 - 92122 (-)
Gene ID: HRGMv2_0297_11_72
Type: CAZyme
Location: 92164 - 93087 (-)
Gene ID: HRGMv2_0297_11_73
Type: CAZyme
Location: 93098 - 94009 (-)
Gene ID: HRGMv2_0297_11_74
Type: CAZyme
Location: 94016 - 94861 (-)
Gene ID: HRGMv2_0297_11_75
Type: CAZyme
Location: 94858 - 96324 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0297_11_64 vegetarian > omnivore 1.14215 0.02872

🧭 Explore Read Mapping of CGC

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