PROTEIN: HRGMv2_0297_11_70
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Protein File & Metadata
Source:
HRGMv2_0297_11_70.pdb
Genome ID:
Protein ID:
HRGMv2_0297_11_70
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Protein Sequence
MKLASFDIFD TTLVRKCGAP DNIFYLLSKR IYPQNQALQN SFFQWRKEAE QKAMIRLKDN 60 YLKLEDIYTE FDTVSFPGWN VAQLITMETE LEFAELVAVD EIKQLILKKR NEGYTICFIS 120 DMYLPERVLK SKLLEEGCAD IGDKVFVSCE YRATKSEGTL YEIVRKNFDP ITLWEHYGDN 180 AYSDYKKAAK RGIKATLVHT DYTSVEQFIL SSSAFFPFYS DLSVLVGLQR ATRLSLQKKG 240 DNIDNATDFI ASLYYPYIDF IFKKAKDLGI TKLHFLSRDG YILYKIAEVV QKRYPEIKLN 300 YLFVSRYSLF LPSIYSLSRE EMYENKGVTS FCHHKVKVKD ILDGLHTTLE ELGDVFTNRI 360 TFKKILTPEQ EDLFFEVLQS AEVKELILKK AKDERKVLIE YFTQEGLFNV EKQALVDIGW 420 IGTSRLMINR ILTNEGGRLV EGFYWGCAPE SLAPRYGIFH SFYGSSLYKS NVVTLLEQYY 480 SASSYASTKG YYYGKDGIKP KFKDIKYTQS QEIVEDNTKA LQQFAQLIGT YDYLDFSQAM 540 PVFGGLYLKA FLEMSCNIRF STFDKLGIYE DGSNYYRVLT KINVLQLLSY LYKGKIKGVY 600 FPRQSIYYTY GIKIFKPECC WREKRRSFMK KYILPLKLKM YYYLRKK 647
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 6 | 615 | 1 | 628 | 0.7207 |
0.774 |
| AF-Q0P8I2-F1-model_v4 | 1 | 616 | 368 | 908 | 0.5304 |
0.7668 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 637 | 433 | 1088 | 0.6725 |
0.8631 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 645 | 341 | 989 | 0.627 |
0.7781 |
| WAJ24550.1 | GT2 | 1 | 613 | 341 | 968 | 0.6228 |
0.8058 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 620 | 341 | 964 | 0.6085 |
0.7831 |
| U5MZQ8 | GT2 | 1 | 620 | 341 | 964 | 0.6085 |
0.7831 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 1 | 617 | 441 | 1015 | 0.6022 |
0.8244 |
| A6M2M4 | GT2 | 1 | 643 | 13 | 1054 | 0.6003 |
0.8198 |
| WII09730.1 | GT111 | 1 | 617 | 398 | 943 | 0.5942 |
0.8294 |
| A0A975E9I4 | GT2 | 1 | 618 | 430 | 1004 | 0.5937 |
0.809 |
| UKD35065.1 | GT111 | 1 | 645 | 279 | 931 | 0.5828 |
0.7002 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 637 | 433 | 1088 | 0.6725 |
0.8631 |
| WAJ24550.1 | GT2 | 1 | 613 | 341 | 968 | 0.6228 |
0.8058 |
| U5MZQ8 | GT2 | 1 | 620 | 341 | 964 | 0.6085 |
0.7831 |
| A0A078BDS9 | GT2 | 1 | 617 | 441 | 1015 | 0.6022 |
0.8244 |
| A6M2M4 | GT2 | 1 | 643 | 13 | 1054 | 0.6003 |
0.8198 |
| WII09730.1 | GT111 | 1 | 617 | 398 | 943 | 0.5942 |
0.8294 |
| A0A975E9I4 | GT2 | 1 | 618 | 430 | 1004 | 0.5937 |
0.809 |
| UKD35065.1 | GT111 | 1 | 645 | 279 | 931 | 0.5828 |
0.7002 |
| A0A0U3BMS4 | GT111 | 1 | 647 | 309 | 951 | 0.5794 |
0.7042 |
| AKJ53103.1 | GT8 | 1 | 647 | 320 | 954 | 0.5667 |
0.696 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 1 | 627 | 243 | 871 | 0.5982 |
0.7431 |
| 8a0m-assembly2.cif.gz_D | 1 | 625 | 272 | 883 | 0.585 |
0.7452 |
| 8a0c-assembly1.cif.gz_A | 1 | 627 | 382 | 1023 | 0.5774 |
0.7553 |
| 8a0m-assembly2.cif.gz_C | 1 | 627 | 377 | 1019 | 0.5763 |
0.7529 |
| 8a0m-assembly1.cif.gz_A | 1 | 627 | 376 | 1020 | 0.5758 |
0.7521 |
| 8a0c-assembly1.cif.gz_B | 1 | 627 | 382 | 1022 | 0.5746 |
0.7508 |
| 7shg-assembly1.cif.gz_A | 23 | 600 | 21 | 591 | 0.4945 |
0.5423 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.