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Cluster: HRGMv2_0159_CGC71

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_15 HRGMv2_0159_15_71 91057 94299 + 1.B.14.6.1
TC HRGMv2_0159_15 HRGMv2_0159_15_72 94311 95786 + 8.A.46.1.2
pfam HRGMv2_0159_15 HRGMv2_0159_15_73 95820 97202 + DUF5016
CAZyme HRGMv2_0159_15 HRGMv2_0159_15_74 97241 99751 + GH20
CAZyme HRGMv2_0159_15 HRGMv2_0159_15_75 99773 101401 + GH20
NULL(UNKNOWN) HRGMv2_0159_15 HRGMv2_0159_15_76 101423 102538 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0159_15 HRGMv2_0159_15_77 102667 104280 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0159_15 HRGMv2_0159_15_78 104415 105449 - 8.A.1.1.2
pfam HRGMv2_0159_15 HRGMv2_0159_15_79 105522 106841 - OEP | OEP
TC HRGMv2_0159_15 HRGMv2_0159_15_80 107215 108444 + 2.A.1.2.97
Gene ID: HRGMv2_0159_15_71
Type: TC
Location: 91057 - 94299 (+)
Gene ID: HRGMv2_0159_15_72
Type: TC
Location: 94311 - 95786 (+)
Gene ID: HRGMv2_0159_15_73
Type: pfam
Location: 95820 - 97202 (+)
Gene ID: HRGMv2_0159_15_74
Type: CAZyme
Location: 97241 - 99751 (+)
Gene ID: HRGMv2_0159_15_75
Type: CAZyme
Location: 99773 - 101401 (+)
Gene ID: HRGMv2_0159_15_76
Type:
Location: 101423 - 102538 (+)
Gene ID: HRGMv2_0159_15_77
Type:
Location: 102667 - 104280 (-)
Gene ID: HRGMv2_0159_15_78
Type: TC
Location: 104415 - 105449 (-)
Gene ID: HRGMv2_0159_15_79
Type: pfam
Location: 105522 - 106841 (-)
Gene ID: HRGMv2_0159_15_80
Type: TC
Location: 107215 - 108444 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0159_15_76 vegan > omnivore 1.01136 0.00020

🧭 Explore Read Mapping of CGC

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