PROTEIN: HRGMv2_0159_15_77
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0159_15_77.pdb
Genome ID:
Protein ID:
HRGMv2_0159_15_77
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSAPVLNGPF ILPMFRSFVP RRMQPWIYLF IAVTFQLSGG VYLGALNQMI GSMALMREDI 60 LMCMYANLAG MAMYFPLLFR MKFRFTNKTL LTSAALGVLL CNLIAPHITF LPLLWLICFI 120 EGMCKIQGTF ECMSNIQLWM TPKRDFTVFF PWLHIVILGS IQLSDLITTY LMYHYHWTYM 180 NLFIAGLMLI VLLIQFTCVK HFRFMRKFPL FGIDWLGGVL WAALLAEIAF LFNYGDWYDW 240 WNSPVIRQLT IVIFITLGIC IWRMMTIRHP FLEPKMWTYR HFWSLLGLVT LVEAFLATEH 300 VLEEVFYEEV MKYEELVSSQ LDWFAIIGIV CGCVFSYWWM HIKQYNYVRL VIVGFVGLIG 360 YLIGFYLTLS TDIHISQLYL PTVCRGFAYA VLSATFMVCL EEIMTFQHFF QGLSVFNMLH 420 MVIGGVLGGA IYAQGLAYYV PDNLARYGSA IDHVSFSSNP FNLGHYMEEF ISQMMEISIK 480 QIYGWVAYAC IFLFLLLLLY DFPVRRSLKS MPSWREVARE VKNTFWRTTH TPSGKEK 537
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 1 | 506 | 1 | 497 | 0.8199 |
0.8767 |
| AF-A0A0H3GSP9-F1-model_v4 | 1 | 519 | 12 | 548 | 0.817 |
0.8687 |
| AF-Q32DH7-F1-model_v4 | 1 | 506 | 1 | 504 | 0.8096 |
0.8578 |
| AF-Q5F680-F1-model_v4 | 3 | 506 | 2 | 498 | 0.8078 |
0.8604 |
| AF-P0AEJ0-F1-model_v4 | 1 | 506 | 1 | 500 | 0.804 |
0.8587 |
| AF-P52600-F1-model_v4 | 1 | 506 | 2 | 504 | 0.8006 |
0.8511 |
| AF-Q9I482-F1-model_v4 | 1 | 522 | 1 | 480 | 0.8002 |
0.8604 |
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 506 | 5 | 516 | 0.7948 |
0.8447 |
| AF-Q9I4A2-F1-model_v4 | 5 | 509 | 3 | 503 | 0.7936 |
0.8385 |
| AF-A0A0H3GPJ5-F1-model_v4 | 1 | 507 | 1 | 468 | 0.7886 |
0.8634 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 4 | 510 | 7 | 536 | 0.7239 |
0.7957 |
| ARF89445.1 | GT1 | 1 | 513 | 260 | 959 | 0.6435 |
0.8645 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 7 | 506 | 16 | 463 | 0.6408 |
0.7448 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 9 | 528 | 30 | 744 | 0.5932 |
0.7892 |
| A0A918L8E6 | GT2 | 10 | 537 | 1 | 655 | 0.56 |
0.6446 |
| A0A3C1RID2 | GH17 | 5 | 537 | 5 | 648 | 0.5454 |
0.66 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 2 | 502 | 1 | 456 | 0.5422 |
0.7519 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 507 | 291 | 751 | 0.5411 |
0.744 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 5 | 536 | 8 | 730 | 0.5401 |
0.6528 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 506 | 52 | 823 | 0.539 |
0.6979 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 4 | 510 | 7 | 536 | 0.7239 |
0.7957 |
| ARF89445.1 | GT1 | 1 | 513 | 260 | 959 | 0.6435 |
0.8645 |
| A0A387HHJ8 | GT1 | 9 | 528 | 30 | 744 | 0.5932 |
0.7892 |
| A0A918L8E6 | GT2 | 10 | 537 | 1 | 655 | 0.56 |
0.6446 |
| A0A3C1RID2 | GH17 | 5 | 537 | 5 | 648 | 0.5454 |
0.66 |
| A0A7H8RF34 | CBM24 | 1 | 507 | 291 | 751 | 0.5411 |
0.744 |
| BEI93633.1 | AA6 | 1 | 523 | 40 | 615 | 0.5298 |
0.644 |
| A0A8H8MAC7 | CE16 | 4 | 532 | 55 | 736 | 0.5275 |
0.632 |
| A0A9Q9RZ67 | GH78 | 1 | 536 | 708 | 1469 | 0.5256 |
0.7747 |
| S5VEU6 | CE14 | 5 | 533 | 14 | 798 | 0.5215 |
0.6409 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 9 | 506 | 1 | 483 | 0.7601 |
0.8176 |
| 8pnl-assembly2.cif.gz_C | 9 | 501 | 1 | 484 | 0.7509 |
0.8096 |
| 7y58-assembly1.cif.gz_A | 5 | 506 | 6 | 503 | 0.7476 |
0.8017 |
| 7d5p-assembly2.cif.gz_B | 24 | 506 | 1 | 413 | 0.7191 |
0.8272 |
| 7d5p-assembly1.cif.gz_A | 10 | 506 | 1 | 408 | 0.7184 |
0.8304 |
| 7d5q-assembly2.cif.gz_B | 24 | 506 | 1 | 411 | 0.7147 |
0.8242 |
| 7d5q-assembly1.cif.gz_A | 24 | 506 | 1 | 403 | 0.7119 |
0.8271 |
| 6kkl-assembly1.cif.gz_A | 19 | 506 | 1 | 370 | 0.7066 |
0.8508 |
| 7yr5-assembly1.cif.gz_A | 8 | 510 | 1 | 384 | 0.7009 |
0.8317 |
| 7bp3-assembly1.cif.gz_B | 20 | 528 | 1 | 394 | 0.7006 |
0.8214 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 3 | 506 | 2 | 498 | 0.8123 |
0.8656 |
| AF-P0DPR7-F1-model_v4 | 5 | 506 | 4 | 509 | 0.8079 |
0.8578 |
| AF-P0AEJ1-F1-model_v4 | 1 | 506 | 1 | 501 | 0.8057 |
0.8589 |
| AF-P0AEJ0-F1-model_v4 | 1 | 506 | 1 | 500 | 0.804 |
0.8587 |
| AF-P44927-F1-model_v4 | 1 | 506 | 2 | 504 | 0.8007 |
0.8499 |
| AF-P52600-F1-model_v4 | 1 | 506 | 2 | 504 | 0.8006 |
0.8511 |
| AF-P32369-F1-model_v4 | 2 | 517 | 1 | 477 | 0.7867 |
0.8506 |
| AF-O35018-F1-model_v4 | 1 | 503 | 6 | 473 | 0.7785 |
0.8574 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 503 | 1 | 468 | 0.7784 |
0.8508 |
| AF-P23054-F1-model_v4 | 8 | 509 | 4 | 458 | 0.7754 |
0.8577 |